Gene M446_1088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1088 
Symbol 
ID6131618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1212646 
End bp1213632 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content72% 
IMG OID641641378 
ProductHflC protein 
Protein accessionYP_001768050 
Protein GI170739395 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID[TIGR01932] HflC protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.11718 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGCA GCAACGCCCT GCGGACCGCC GCGATCGGCC TGATCGCCGT CGTGGCCCTC 
CTGCTCTACG CCTCGGCCTT CACGGTGAGC CAGACCCAGC AGGCCCTCGT GCTGCAGTTC
GGCCGCGTGC GCACCGTGCT GAACCAGGCC GGCACCGACC GGCCCGGCCT CTACTTCAAA
ATCCCGTTCT TCGAGACCGT CGTGCTGTTC GAGAAGCGCC TGCTCGACCT CGACCTGCCG
GTGCAGACCG TGCTCTCGGC CGACCGGCAG AACCTCGAGG TCGACGCCTT CGCCCGCTAC
AAGGTCTCGG ACCCGCTGCG CTTCTATCAG GCGGTGAACA ACGTGCAGGT CGCCAATCAG
CGCCTGTCGA GCTTCACCAA CGCGGCGATG CGCAACGTGC TCGCCAGCGC CTCGCGCGAC
GCCATCGTGC GGACCCAGCG CGAGGCGCTG ATGAACCGCA TCCAGGAGGA CGTGAACCGG
CAGGCCAAGA ATCTCGGCAT CGAGATCATC GACCTGCGCC TGACCCGCGT CGACCTGCCG
GCCGCCAACA GCCAGGCGGT CTACGGCCGG ATGCAGACCG AGCGCCAGCG CGAGGCCGCC
GACCTGCGGG CGAACGGCGA GCGCGACGCG GCCACGATCC GGGCGCGGGC CGACCGCGAG
GTGACGGTGC TGGTCGCCGA GGCGAGCCAG AAGGCCGACC AGCTGCGCGG CGAGGGCGAC
GCGGACCGCA ACCGCATCCT GGCCCAGGCC TTCGGGCAGG ATCCGGACTT CTTCGCCTTC
TACCGCTCGA TGCAGGCCTA CGAGAAGGGG CTCACGGGTC CCGACACCCG CCTGGTGATC
GGCCCCGGCT CGGACTTCTT CCGCTACTTC AACGACCCGC AGGGCCGGTC GCGTCCCGCC
GCCGCCTCGC CCGCCCCGGG CCAGTCCGGC GCCCCGGCGC CGAGCGGCCC GGCTCCGGCG
CCGGGTACCC CGGCGCCCGG CCAGTAG
 
Protein sequence
MNGSNALRTA AIGLIAVVAL LLYASAFTVS QTQQALVLQF GRVRTVLNQA GTDRPGLYFK 
IPFFETVVLF EKRLLDLDLP VQTVLSADRQ NLEVDAFARY KVSDPLRFYQ AVNNVQVANQ
RLSSFTNAAM RNVLASASRD AIVRTQREAL MNRIQEDVNR QAKNLGIEII DLRLTRVDLP
AANSQAVYGR MQTERQREAA DLRANGERDA ATIRARADRE VTVLVAEASQ KADQLRGEGD
ADRNRILAQA FGQDPDFFAF YRSMQAYEKG LTGPDTRLVI GPGSDFFRYF NDPQGRSRPA
AASPAPGQSG APAPSGPAPA PGTPAPGQ