Gene M446_0478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0478 
Symbol 
ID6133376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp561514 
End bp562515 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content77% 
IMG OID641640801 
ProductABC transporter related 
Protein accessionYP_001767476 
Protein GI170738821 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1125] ABC-type proline/glycine betaine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.201964 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00297277 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCCGCT TCGAGGGCGC CGGCAAGGCC TATCCGGGCC ATGCCCGGCC GGTCGTCGAC 
CGGCTCGACC TCGCCGTCGA GGAGGGGACC ACCTGCGTGC TGATCGGCCC CTCGGGCTGC
GGCAAGTCGA CGACCCTGCG GATGGTCAAC CGCCTCGTGA CCCCGAGCAC GGGGCGCGTC
CGGGTCGGCG GGCGCGACGT GGCCGAGCTC GACCCGATCG GGCTGCGGCG GCGCACCGGC
TACGTGCTCC AGGGCGTCGG GCTGTTCCCC CATCGCAGCG TGGCGCAGAA CGTCGCCACG
GTGCCGGGCC TGCTCGGATG GCCCCGGCGC CGGATCGCCG AGCGGGTGGA TGCCATGCTC
GACCTCGTCG GGCTCGACCC CGCCACGTTC CGCGACCGGC GGCCCGATTC CCTCTCGGGC
GGCCAGCGCC AGCGGGTCGG CGTCGCCCGG GCGCTCGCCG CCGACCCACC CGTGCTTTTG
ATGGACGAGC CCTTCGGGGC GGTGGACCCG CTCGTGCGCG GGCGCCTGCA GGCGGAGATC
GGCGCCATCC TGCGGCGCCT CGGCAAGACC GTGCTGTTCG TCACCCACGA CATCGACGAG
GCCCTGCGCA TGGGCGACCG CGTCGCCCTG ATGCGGGAGG GCCGCCTCGT GCAGGTCGAC
CCGCCCGAGC GCCTGCTCGC CAGGCCCGCC GATCCCTTCG CGGAGGAGTT CGTCGGCGCC
GACCGCTGGC TGCGCCGCCT CGCCCTGATC CCGGCCGCCG CCGCCCGGAC GGCCGGCCCG
CCGCCGCGTG CCTCGCTGCC GCCGCTTGCC TCGCTGCCGC CGCTTGCCTC GCTGCCGCCG
CTTGCCTCGC TGCCGCCGCA GGCCTCCCTG CGGGACGCGC TCTCGGCGCT GGTCGCCGGG
ACGGACGAGG CGGTGGGGCT CGCGGAGGGC GGCGTGGTGA CGCTCTCCTC CCTGCGCGCC
GCTGCGGCCG ATTCGGCCGG TGGCTTCACC TCTCCCCCCT GA
 
Protein sequence
MIRFEGAGKA YPGHARPVVD RLDLAVEEGT TCVLIGPSGC GKSTTLRMVN RLVTPSTGRV 
RVGGRDVAEL DPIGLRRRTG YVLQGVGLFP HRSVAQNVAT VPGLLGWPRR RIAERVDAML
DLVGLDPATF RDRRPDSLSG GQRQRVGVAR ALAADPPVLL MDEPFGAVDP LVRGRLQAEI
GAILRRLGKT VLFVTHDIDE ALRMGDRVAL MREGRLVQVD PPERLLARPA DPFAEEFVGA
DRWLRRLALI PAAAARTAGP PPRASLPPLA SLPPLASLPP LASLPPQASL RDALSALVAG
TDEAVGLAEG GVVTLSSLRA AAADSAGGFT SPP