| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_0427 |
|---|
| Symbol | |
|---|
| ID | 6131693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 508914 |
|---|
| End bp | 512033 |
|---|
| Gene Length | 3120 bp |
|---|
| Protein Length | 1039 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641640752 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_001767428 |
|---|
| Protein GI | 170738773 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.513566 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0142489 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTCA ACGTCTCCGC CTGGGCGATC CGCAAGCCGA TCCCCTCGAT CGTGCTGTTC
CTGGTGCTGG GGCTGCTCGG GCTCGTCAGC TTCCGCACCC TGCCGATCAC CCGCTTCCCC
AACATCGACG TGCCGCTCGT CTCGGTGTCG ATCAACCAGC CGGGCGCCGC GCCCTCGGAG
CTGCAGACCC AGGTCACGAA ATGGGTCGAG GACGCCGTGG CGGGCGTGAA GGGCGTCAAG
CACATCACCT CGGCGATCAC CGAGGGCAAC TCGGCCACCA CGGTCGAATT CCGGCTCGAG
GTCAACACCG ACCGGGCGGT GAACGACGTC AAGGACGCGA TCGCCAAGAT CCGCATGAAC
CTGCCGCGGA CGATCGAGGA GCCGATCATC AACCGCGTCG AGATCGCGGG GCTTCCGATC
ATGATCTACG GCGCCTCGGC GCCCGCCATG ACCCCGGAGG ACCTGTCCTG GTTCGTGGAC
GACGTGGTGG CGCGGCAGAT CCAGGGCCTG CGCGGGGTCG GCGGCGTCGA GCGGCTCGGC
GGCGTCAACC GGGAGGTGCG CGTCACCCTC AAGCCCGACC GGCTGCTCTC GCTCGGCATC
ACCGCCGCCG ACGTGAACCG GCAGCTGCGC CTCACCAGCG CCGACATGGC GGGCGGGCGG
GCCGAGCTCG GCGGCCAGGA GCAGTCGATC CGCACCCTGG CGGCCTCCGC GAGCCTCGAC
ACCCTCGCGG CCACCTCGAT CGTGCTGCCG GGCGGGCGCA AGGTGCGCCT CGACGACCTC
GCCACCCTGA CGGACGGGGC GGAGGAGCCC CGCGTCTTCG CGCGCCTCAA CGGGGAGCCG
GTCGTCGCCT TCGCGATCTC CCGCGCCAGC GGCGCCAGCG ACGCCTCGGT CGCCCAGCTG
GTGGCCCGGA AGATCGACGA GTTGCGCGCC GCCCACCCGA ACGTCCGCTT CGACCTGATC
GACACCTCGG TCACCAACAC GATCGGCAAT TACGAATCCG CCATGCACGG CCTGATGGAG
GGGGCGGCCC TGGCGGTGCT GGTGGTGTTC CTGTTCCTGC GCGACTGGCG GGCGACGCTG
ATCGCCGCGG TGGCGCTGCC GCTCTCGGTC TTCCCGACCT TCTGGGCGAT GAGCGCCATG
GGCTTCTCGC TCAACGCGGT CAGCCTGCTC GCCATCACCC TCGTCACCGG CATCCTGGTC
GACGACGCCA TCGTGGAGAT CGAGAACATC GTCCGGCACG TGCGGCTCGG CAAGTCGCCC
TACCGGGCCG CCATCGAGGG GGCCGACGAG ATCGGCCTCG CGGTCATCGC CATCACGGCG
ACGCTGGTGG CGATCTTCGC GCCGGTGAGC TTCATGGGCG GCATCGCCGG CCAGTACTTC
AAGCAGTTCG GCCTCACCAT CGCGGCCGCG GTGTTCATGT CGCTGCTCGT CGCCCGCCTG
ATCACCCCGA TGATGGCGGC CTACTTCATG CGCGACCACG GCCACGAGGA GGAGACGCCC
GGCCCGGTGA TGCGCACCTA CACCCGCGTG GTGGCGTGGT CGGTGCGGCA CAAGTTCGTG
ACGCTGGTGG TGGGCCTCGC GCTGTTCGCC GGCTCCCTCA TGTCGACCAA GCTGCTGCCG
GCCGGCTTCC TGCCGAAGGA GGACGCGGCG CGCACCCTGA TGGTGCTCGA ACTGCCGCCC
GGCGCCAAGC TCGACGACAC GATCGCGGTC TCGGACCGGG TGGTGCAGAA GATCCGCGCA
TTGCCCGAGG TGCGCTCCGT CTTCGTCGAT GGTGGGCGCC AGCTCCCGGG CAAGAAGGAG
ATCCGGCTCG CCACGCTGAC GATCAACCTG ACGCCGAAGA ACACCCGCAC GCGCACGCAG
GGCGACCTTG AGGCGGCGAT CATGGCCGCG CTGCGCGACG AGCCCGACAT CCGCTACTGG
TCCCTGCGCG AGGGCGGCCA GCGCGATTTC ACCCTGATCG TGGCGGGGCC CGACACCGAG
GTGGTGCGGG ACGTGGCCGA GCGGATGCAG CGCGAGGTCG CGCAGGTGCC GAACCTCGTC
AACGTGATGT CGACCGCGCC GCTCGACCGC ACCGAGCTGC GCATCCGCCC CAAACCCGCG
GTCGCGGCCG ATCTCGGGGT CTCGACCGAC ACCATCGCCG AGACCGTGCG CGTCGGCACG
ATCGGCGACA TCGGCGCCAA CCTCGCCAAG TTCAACGCCG TCGACCGGCA GATCCCGATC
CGGGTGCAGC TGCCGGCCGA GGCCCGCGGC GACCTGCAGG CGCTGGAGGC GCTGAAGGTG
CCGACGAAGA CCGGCGCCGC GGTGCCGCTG ACCGCGGTGG CCGACATCAG CCTCGGCCGC
GGGCCGACCG CGATCGACCG CTACGACCGC GCCGTCCGGG TGGCGCTGGA GGCCAATCTC
CAGGGCTCGG ACGCCCTCGC CGAGGCGATC GCCAAGGCGC TGGCGACCCC GGCCGCGAAG
ACTCTGCCGC CGGGGGTGGC GCTGCGCCAG ACCGGCGACG CCGAGGTGAT GGGCGAGGTC
TTCGAGGGCT TCGCCCTCGC CATGGGCGCC GGCCTGATGA TGGTGCTCGG CGTGCTGATC
CTGCTCTTCG GCTCGTTCCT GCAGCCGCTC ACCATCCTGT TCTCGCTCCC GCTCTCGATC
GGCGGGGCGA TCCTCGGCCT CCTGATCTTC AACCGGCCGA TCTCGATGCC GGTCGTGATC
GGCATCCTGA TGCTGATGGG CGTGGTGACG AAGAACGCCA TCATGCTGGT GGATTTCGCC
GTCGAGGAGA TGGCCCGGGG CGTCGACCGC ATCACCGCGA TCACCGATGC GGGCCGCAAG
CGCGCCCGCC CGATCGTGAT GACGACGATC GCCATGGCGG CCGGCATGGT GCCCTCCGCG
ATGGCCCTCG GCATCGGCGG CGAGTTCCGC TCGCCGATGG CGATCGCGGT GATCTCGGGG
CTGATCGTCT CGACGCTCCT GTCGCTGCTC TTCGTGCCGG CGATCTTCGT GCTGATGGAC
GACCTCGCCC GGCTGTTCGT GCGGCTGTTC GGCCGCTTCG TCGGGGCGGT GGACGAGGCC
CCCGCCCACC CGCACGCGGC GGCGCCCTAC GCGCCCCCGC CGCGCATCGC CGCCGAGTAG
|
|---|
| Protein sequence | MRLNVSAWAI RKPIPSIVLF LVLGLLGLVS FRTLPITRFP NIDVPLVSVS INQPGAAPSE
LQTQVTKWVE DAVAGVKGVK HITSAITEGN SATTVEFRLE VNTDRAVNDV KDAIAKIRMN
LPRTIEEPII NRVEIAGLPI MIYGASAPAM TPEDLSWFVD DVVARQIQGL RGVGGVERLG
GVNREVRVTL KPDRLLSLGI TAADVNRQLR LTSADMAGGR AELGGQEQSI RTLAASASLD
TLAATSIVLP GGRKVRLDDL ATLTDGAEEP RVFARLNGEP VVAFAISRAS GASDASVAQL
VARKIDELRA AHPNVRFDLI DTSVTNTIGN YESAMHGLME GAALAVLVVF LFLRDWRATL
IAAVALPLSV FPTFWAMSAM GFSLNAVSLL AITLVTGILV DDAIVEIENI VRHVRLGKSP
YRAAIEGADE IGLAVIAITA TLVAIFAPVS FMGGIAGQYF KQFGLTIAAA VFMSLLVARL
ITPMMAAYFM RDHGHEEETP GPVMRTYTRV VAWSVRHKFV TLVVGLALFA GSLMSTKLLP
AGFLPKEDAA RTLMVLELPP GAKLDDTIAV SDRVVQKIRA LPEVRSVFVD GGRQLPGKKE
IRLATLTINL TPKNTRTRTQ GDLEAAIMAA LRDEPDIRYW SLREGGQRDF TLIVAGPDTE
VVRDVAERMQ REVAQVPNLV NVMSTAPLDR TELRIRPKPA VAADLGVSTD TIAETVRVGT
IGDIGANLAK FNAVDRQIPI RVQLPAEARG DLQALEALKV PTKTGAAVPL TAVADISLGR
GPTAIDRYDR AVRVALEANL QGSDALAEAI AKALATPAAK TLPPGVALRQ TGDAEVMGEV
FEGFALAMGA GLMMVLGVLI LLFGSFLQPL TILFSLPLSI GGAILGLLIF NRPISMPVVI
GILMLMGVVT KNAIMLVDFA VEEMARGVDR ITAITDAGRK RARPIVMTTI AMAAGMVPSA
MALGIGGEFR SPMAIAVISG LIVSTLLSLL FVPAIFVLMD DLARLFVRLF GRFVGAVDEA
PAHPHAAAPY APPPRIAAE
|
|---|
| |