Gene Lreu_1772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1772 
Symbol 
ID5189075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand+ 
Start bp1825213 
End bp1825839 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content40% 
IMG OID640591617 
ProductSNARE associated Golgi protein 
Protein accessionYP_001272348 
Protein GI148544978 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCTT GGATAACGGA ATTTATTAAT CAGTTTGGTT ATTTTGCAAT TGCCTTACTA 
ATTGCCCTTG AAAATGTCTT TCCACCGCTA CCATCCGAAA TTATCCTTAC AATGAGCGGA 
TTCATGACGA CCACCACTTC ATTATCAATT ATTGGTGTAA TTATCGCCGC AACAATTGGT 
TCGCTTATCG GGGCACTTAT CTTATATGCC CTTGGTCGCC AGTTAACTGT TAAACGTCTC 
GAACGTCTTC TTAGTCATCG CTTATTTAAA CTTCTAGGCT TTCATCAAGA TGATGCTAAA 
AAAGCAGTCG ATTGGTTTAA TAAACATGGG ACAGGTGGCA TTCTCTATGG CCGCTGCATT 
CCCGTTATCC GCAGTTTAAT CTCTATTCCT GCTGGGATCG CGCAAACTTC ATTAGGGAAA 
TTCTGCCTTC TCACTACGAT CGGAAGCGCA ATTTGGAATA CACTGCTTGT CGTTCTCGGC 
GCTTGGGTCG GCCAATCGTG GAATAAAATT GTCATAATCT TTAATGATTA TACAACCGTT 
GCTATCATCA TTATGGCGAT CGTTGGTTTA TACTTTGCTT ATCGGTGGTA TCAAAAAAGA 
ATAAAAAAAC CTAAATTTCA AGAATAA
 
Protein sequence
MNAWITEFIN QFGYFAIALL IALENVFPPL PSEIILTMSG FMTTTTSLSI IGVIIAATIG 
SLIGALILYA LGRQLTVKRL ERLLSHRLFK LLGFHQDDAK KAVDWFNKHG TGGILYGRCI 
PVIRSLISIP AGIAQTSLGK FCLLTTIGSA IWNTLLVVLG AWVGQSWNKI VIIFNDYTTV 
AIIIMAIVGL YFAYRWYQKR IKKPKFQE