Gene Lreu_1656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1656 
Symbol 
ID5188606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand+ 
Start bp1715612 
End bp1716283 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content42% 
IMG OID640591501 
Productintegrase catalytic subunit 
Protein accessionYP_001272232 
Protein GI148544862 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTACAC AGTTAAGCTT TGAAAACCGT TTAAGCTTTA CCGCTGGATT AAAACGAATA 
ACTAACTGCA TGCGTAAGCA TGGAATTAGA GCAAATATTA GGAAGAAGAA GCGCAATCGA 
ATTCAACGCC ATGAAGAATA CATCAATGAC AACTTATTGC AGGGACAATT CGACCGTAAA 
ACTAAAAATG AAGTGTGGGT TACCGACACA ACGGAAGTAG CCTACGGCGG ACACACACTT 
CATAAAGTAC GAGTACACGT TATTTTAGAT TTATATGGTC GTTACGCTTT AAGCTACAAT 
ATTTCAGACA CAGAAACTTC ATCAGCAGTA ATTGAAACCT TTAATCGTGC TTTTATGGTT 
GAGCCTGATG CGCAACCAAT GATCCATACT GACCGCGGGT CAGCTTACTG CTCAAGTATG 
TTCAACGACT ACTTAGTCTC TAAAAATTGT ATTCATAGTA TGTCACACCC CGGTCATCCT 
TGGGAAAACT CACCCATAGA GCGTTGGTGG AATGACTTCA AGCTAATCTG GATTAACAAA 
CACCCTCGTC CTAAGACGCT AGCAGAGCTA GAACAACTCG TCAAAGGAGT CATTGAATAC 
TTTAATACCA AACGCGCTTA CACAAGCAAA AACGGCTTGA CCGCGGAACA ATTCCGCAAT 
CAAGCCGCCT AA
 
Protein sequence
MTTQLSFENR LSFTAGLKRI TNCMRKHGIR ANIRKKKRNR IQRHEEYIND NLLQGQFDRK 
TKNEVWVTDT TEVAYGGHTL HKVRVHVILD LYGRYALSYN ISDTETSSAV IETFNRAFMV 
EPDAQPMIHT DRGSAYCSSM FNDYLVSKNC IHSMSHPGHP WENSPIERWW NDFKLIWINK 
HPRPKTLAEL EQLVKGVIEY FNTKRAYTSK NGLTAEQFRN QAA