Gene Lreu_1584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1584 
Symbol 
ID5188916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand+ 
Start bp1640654 
End bp1641289 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content49% 
IMG OID640591431 
Productintegrase catalytic subunit 
Protein accessionYP_001272162 
Protein GI148544792 
COG category[L] Replication, recombination and repair 
COG ID[COG2826] Transposase and inactivated derivatives, IS30 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00305908 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGAAC GTGGCCAGTT CGGCTTCGAT GTCCGTTCCT TGCCGATGCG AGGTAAGCGG 
TACCCGAATG GCTATGTCGA GCGCCGCGGG AAGGCTGGCC AATTGGGGCG AAGTATTCAC 
GAGCGTGACA AGGACTTTCC GCACTATACC ACTGAATTTG GGCACCTTGA AGCTGATACC 
GTCCAAGGCA AAAAGCACCG AGGGGCGGTA ATGACCCTGA CCGAACGCCA ATCGAAGGTC 
GAAATTGTAC TCAATGTGCA CGAAAAGACG GCTGATGCGA TTAACCAACA CTTAAGTCAG 
TGGCTTCGGA AATTCCCGCG GCACTTCTTC AAATCGATTA CCTTTGACAA CGGAAAAGAA 
TTCGCCGGCT GGCGCGAGAT TGCCAATCAA TTTGACCTTC ACACTTACTT TGCCGAGGTT 
GGTGCTCCCA ATCAACGAGG GCTGAACGAA AACAACAACG GTCTTTTACG TCGGGATGGC 
TTAACGAAAC AGCTAGATTT CCGCAATCTT CCTGATGAAT TGGTAACCCA ACTGATGAGT 
AAGCGAAATA ACCTGCCCCG TAAATCACTA GGCTATCGAA CTCCATATGA AGTATTCATG 
TCTTGCGTCA CTAATGAGCA ACTATTTTCT TTCTAA
 
Protein sequence
MFERGQFGFD VRSLPMRGKR YPNGYVERRG KAGQLGRSIH ERDKDFPHYT TEFGHLEADT 
VQGKKHRGAV MTLTERQSKV EIVLNVHEKT ADAINQHLSQ WLRKFPRHFF KSITFDNGKE 
FAGWREIANQ FDLHTYFAEV GAPNQRGLNE NNNGLLRRDG LTKQLDFRNL PDELVTQLMS 
KRNNLPRKSL GYRTPYEVFM SCVTNEQLFS F