| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1457 |
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| Symbol | |
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| ID | 5188443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1516351 |
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| End bp | 1517295 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640591303 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_001272040 |
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| Protein GI | 148544670 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000000155056 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCGAAT TTGAAAAGCC AAATATTCAC AAAGTTGAAG AAACAGATAA CTACGGTAAA
TTTGTCGTAG AACCACTTGA GCGCGGTTAT GGAACCACTC TCGGTAACTC GTTAAGACGT
GTATTAATTG CATCTTTGCC AGGTGCAGCG ATTACGAGTA TGCAAATTGA TGGTGTTTTA
CATGAATTTA GCACTGTTGA AGGTGTAACT GAGGATGTTA CGCAGATTAT CCTAAATCTA
AAGAAAGTTT CTTTGAAGCT TGATTCTGAG GATCAAAAGA ATCTTGAATT AGATGTTAAA
GGACCTGCTG AAGTAACTGC AAGTGATATC CAGGGTGATA ATGAAGTTAC AATCTTAAAT
CCTGATCTGC ATATTGCAAC TGTTGCTGAT GGCGCAGAAT TACACATCAA GTTAACTGCT
GATAAGGGTC GCGGTTACCT TTCTGCTAAC GATAATAAGG CCCGGATGGA TGATTTAGCA
ATTGGTGTTT TACCGATTGA TTCCATCTAT ACCCCAATTG AACGTGTAAA TTACACTGTT
GAAAATGCAC GGGTTGGTCA GCGTAACGAT TATGACAAGT TGACGCTGGA TGTTTGGACT
GATGGTTCAT TAACACCAAC TGAAGCAGTT AGTCTAGGTG CGAAGATTTT GACTGAACAC
TTAGCTATGT TTGTTGATTT AACAGAAACA GCTCAAAATG CTCAAGTGAT GGTTGAAAAA
GAAGAAACAC ACAAAGAGAA GATGCTTGAA ATGACTATTG AAGAGCTTGA TCTCTCTGTA
CGTTCTTACA ATTGTTTGAA GCGAGCTGGT ATCAATACTG TTAAGGAATT AACTGATCGA
ACAGTGTCTG ATATGATGAA GGTTCGGAAC TTAGGACAAA AGTCGTTAGA AGAAATTAAA
CTTAAATTAA ATGATCTTGG TGTTTCATTT CGCCAAGACG ACTAA
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| Protein sequence | MIEFEKPNIH KVEETDNYGK FVVEPLERGY GTTLGNSLRR VLIASLPGAA ITSMQIDGVL
HEFSTVEGVT EDVTQIILNL KKVSLKLDSE DQKNLELDVK GPAEVTASDI QGDNEVTILN
PDLHIATVAD GAELHIKLTA DKGRGYLSAN DNKARMDDLA IGVLPIDSIY TPIERVNYTV
ENARVGQRND YDKLTLDVWT DGSLTPTEAV SLGAKILTEH LAMFVDLTET AQNAQVMVEK
EETHKEKMLE MTIEELDLSV RSYNCLKRAG INTVKELTDR TVSDMMKVRN LGQKSLEEIK
LKLNDLGVSF RQDD
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