| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1441 |
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| Symbol | gatA |
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| ID | 5189091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1500541 |
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| End bp | 1502013 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640591287 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
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| Protein accession | YP_001272024 |
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| Protein GI | 148544654 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00119252 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTTT ACCAAACAAG CTTGAGTCAA TTGCACGATG ACTTGGTAAA TAAGAAAATT
AGTGCAACTG AATTAACCAA GGAAACTTTT GACCACATTA AGGGTAACGA AGATCAAGTT
AAAGCCTTCA TCAGCTTAAA TGAGGACCAA GCACTAAAGC GGGCAGCTGA GATTGATGCA
AAAGGTATTA GTGCTGATCA ATTAACTGCA GGGGTTCCGC TTGCAGTTAA GGATAATATT
TTAACTAAGG GCCTTACAAC GACGGCTGCT TCTAAGATGC TTGAAAACTT TAACCCCGTA
TATGACGCGA CAGTTGTTGA AAAGTTAAAT GCCGCTGATT ACATCAATGT TGGTAAGACT
AACCTTGATG AATTTGCCAT GGGATCATCT ACTGAAAATT CAGCATTCTT TACGACTCAT
AACCCATGGG ATCTTACACG GGTTCCTGGT GGTTCTTCCG GTGGTTCTGC TGCTGCTGTT
GCGGCCGGAG ATGTTTTAGG TGCGCTTGGT ACTGATACTG GTGGTTCTAT TCGGATGCCT
GCTTCCTTTA ACGGTGTCGT TGGGATGAAG CCTACATACG GTCGTGTATC GCGGTGGGGA
ATCATTGCCT TTGGTTCAAG TTTTGACCAA GTCGGCTGGT TGACCCAAAA TGTTAAGGAT
AATGCCTTGT TGACCGCCCT CATCAGTGGA AATGATGAAC GGGATATGAC ATCCTCACTT
AAAGAAGTTC CAGACTGGGC AGCCCAATTA AACGAAAATA CGAATGTTAA AGGCTTACGG
ATTGCTGTGC CAAAGGAATA CTTTGATGGC TTAGACGAAG ATGTTCAAGA AGTAATCAAG
GCTGCTTTGG ACCACTTAGA ATCCCTCGGC GCAATTGTTG ATGAAGTAAG TTTGCCACAC
ACCAAGTATG GGGTTCCTGC TTACTACATT TTAGCCTCAT CTGAAGCATC TTCTAACCTC
CAACGTTACG ATGGTATCCG TTATGGCTTC CGAGCTGCTG ATGTTAAGAA CTTGGAAGAC
GTTTATGTTC GTTCTCGTTC GGAAGGTTTC GGTGAAGAAG TTAAGCGGCG GATTATGTTA
GGGACATTCT CTCTATCTGC TGGTTTCTAT GATGCCTACT TTAATAAGGC CGCTAAAGTT
CGTCGTCTTA TTGCCCAAGA TTTTGAAGAC GTATTTAAGG ATCATGATGT AATCGTTGGT
GCTACTGGTG CTTCAACGGC ATTTAAGATT GGTGCGGAGA TTGACGATCC ACAAACTATG
TACATGAACG ATGTATTGAC TGTTCCCGTT AATATGGCCG GTCTTCCTGC AATGTCCATT
CCTGCTGGCT TCTCTGCTAA AAATGGCATG CCAGTTGGTC TGCAAATCAT CGGAAAAGCA
TTTGACGAAC AAACAGTTTA TAACACTGGA TATGTCTTTG AACAGACAAC TGATTTCCAT
AAGAAGACAC CAAAGTTAGG AGGTCAAAAT TAA
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| Protein sequence | MDFYQTSLSQ LHDDLVNKKI SATELTKETF DHIKGNEDQV KAFISLNEDQ ALKRAAEIDA
KGISADQLTA GVPLAVKDNI LTKGLTTTAA SKMLENFNPV YDATVVEKLN AADYINVGKT
NLDEFAMGSS TENSAFFTTH NPWDLTRVPG GSSGGSAAAV AAGDVLGALG TDTGGSIRMP
ASFNGVVGMK PTYGRVSRWG IIAFGSSFDQ VGWLTQNVKD NALLTALISG NDERDMTSSL
KEVPDWAAQL NENTNVKGLR IAVPKEYFDG LDEDVQEVIK AALDHLESLG AIVDEVSLPH
TKYGVPAYYI LASSEASSNL QRYDGIRYGF RAADVKNLED VYVRSRSEGF GEEVKRRIML
GTFSLSAGFY DAYFNKAAKV RRLIAQDFED VFKDHDVIVG ATGASTAFKI GAEIDDPQTM
YMNDVLTVPV NMAGLPAMSI PAGFSAKNGM PVGLQIIGKA FDEQTVYNTG YVFEQTTDFH
KKTPKLGGQN
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