Gene Lreu_1401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1401 
Symbol 
ID5188342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1458835 
End bp1459269 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content35% 
IMG OID640591250 
Productresponse regulator receiver protein 
Protein accessionYP_001271987 
Protein GI148544617 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3279] Response regulator of the LytR/AlgR family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTAA ACTGTCATAT CGACCCTAAT ATTGAAGAGG AACATCTCGA TTTATTTGTC 
CGTGAAATGA ATCCCCAAAT TAGCAACCTC CTAAAAAGTT TTACAAGTAC CGAACCAGTA
TTATGGTGTT ATGACGCAGA TCAAATCATC CCCATTAAAT TCTCGGATAT CTTTGAATTA
ACTGTCGCTA AGACCGGTAC TAAAATTTCA ACAAAAGATC ATACCTACTT TTATCGTGAA
CGGTTATCCC ACTTCAAAAG CAATCTTCCG AATGACTTTA TTGAAGCATC TTGCAGCACT
ATTTTTAATT ATCATTACCT TGATCACCTT GAGTTATTAG ATAATGGCTT GATAGATGCA
ATTTTAACGA ATGGTAGCCA TATTCAGATT TCACGACGAA AAATCAAAAA TTTGAAAGCG
AGGTTAGGAC TATGA
 
Protein sequence
MKVNCHIDPN IEEEHLDLFV REMNPQISNL LKSFTSTEPV LWCYDADQII PIKFSDIFEL 
TVAKTGTKIS TKDHTYFYRE RLSHFKSNLP NDFIEASCST IFNYHYLDHL ELLDNGLIDA
ILTNGSHIQI SRRKIKNLKA RLGL