| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1383 |
|---|
| Symbol | |
|---|
| ID | 5188278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 1442594 |
|---|
| End bp | 1444015 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640591231 |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_001271969 |
|---|
| Protein GI | 148544599 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGA AAAAAGGTAT TAATACTACA GAACTAACCC TTTTAATTGT GGGGTCGACA
ATTGGTTCAG GAGTATTTGG CATTACCAGT GATTTAGCTA CTGCGGCGGC TCCTGGTCCA
GCAATCATTG CCTGGATTAT AGTAGGGATC GGCGTCTTGA CTTTAGTCCT CTCCCTAACT
AATCTTTCGC AAAAACGGCC AGACCTTGAT TCAGGAATTT TCAGTTATGC GGCGGCTGCT
TTTGGTCCGC TGGGCGAATT TATTTCTGGT TGGGCATATT GGCTTTCCGC CTGGCTCGGT
AATATTGCTT TTGCGACGAT TATGATGAGC GCTCTTGGAA CGTTTTTCCC AAGCTTATTT
GCTAATGGTC AAAACTTATT CTCAATTATT GTTGCAATTA TTTTAACCTG GGTTTTGACA
TTCTTAGTAA ATCGAGGGAT CGAATCAGCG GCCTTTATTA ATTCGATTGG GACGATCTGC
AAGATTATTC CATTAGTCGT CTTTGTTATC TGTGTGATTC TTAGTTTTAA GGCTAAGATC
TTTACTGCTG ATTTCTGGGG CAATGTAACA CAGAACCTTA GTTCAAAAAT CGAAACCGGT
TCAATCTATG ACCAAGTAAA GGCCTCAATT ATGGTAATGA TGTGGCTATT TGTCGGTGTT
GAAGGGGCCT CTGTCCTTTC TAGTCGTGCC AAAACGCGGA CAGATGCTGA ACGTGCTTCT
ATCTTCGGCT TAGTAAGTTT GCTTGTTATC TACATCGTGG TTTCCATTTT GCCATACGGG
GTCATGACCC GGGCCCAGTT AGCAGCTGGT GGTCAACCGG CGCTCGGTGC TATCATGCAA
CACCTGGTTG GAACGTGGGG TGCCGCCCTG ATCAGCATTG GATTAATCGT CTCAGTTTTA
GTTTCATGGC TCTCGTGGAC AATGCTCCCA GCCGAATCAT TAATGCTAAT GGCTGATGAT
GAAACCCTTC CAACATCATG GGGCAAGCTA AATGAAAAAA AAGCGCCAAC ACGGGCATTA
GTAATTACTG GGATTCTTCA ATCGATCTTC CTCTTCTCTT TGCTTTTCAC TACCTATGCC
TACAACTTTG CATATACGCT TTGTACGGCT GCGATTTTGA TCTGTTACCT CCTTGTTGGT
ATTTACCAAA TGATGTACAG TTGGCAGCAC CAAGAATGGG GACAATTTGT TATTGGACTA
ATTGCCACCC TCTTTGAACT GATGGCGATG GTTCTCTCTG GCTGGAAAGA AATAATGGTT
GTTTCAGTCG GTTTTATTCC CGGATTATTC TTCTATGTCC AAGCATGCAA GGAATTCCAT
CACCCAATCA CAGTAAAGGA AAAATGGGCA ATGGGGATTA TCGCTGTCTT TGCGGTTATT
TCCTTAGTAT TAGTAATCAA CGGAACAATT TCAATTAATT AA
|
|---|
| Protein sequence | MSEKKGINTT ELTLLIVGST IGSGVFGITS DLATAAAPGP AIIAWIIVGI GVLTLVLSLT
NLSQKRPDLD SGIFSYAAAA FGPLGEFISG WAYWLSAWLG NIAFATIMMS ALGTFFPSLF
ANGQNLFSII VAIILTWVLT FLVNRGIESA AFINSIGTIC KIIPLVVFVI CVILSFKAKI
FTADFWGNVT QNLSSKIETG SIYDQVKASI MVMMWLFVGV EGASVLSSRA KTRTDAERAS
IFGLVSLLVI YIVVSILPYG VMTRAQLAAG GQPALGAIMQ HLVGTWGAAL ISIGLIVSVL
VSWLSWTMLP AESLMLMADD ETLPTSWGKL NEKKAPTRAL VITGILQSIF LFSLLFTTYA
YNFAYTLCTA AILICYLLVG IYQMMYSWQH QEWGQFVIGL IATLFELMAM VLSGWKEIMV
VSVGFIPGLF FYVQACKEFH HPITVKEKWA MGIIAVFAVI SLVLVINGTI SIN
|
|---|
| |