Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1381 |
Symbol | |
ID | 5188656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1439536 |
End bp | 1440426 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640591229 |
Product | putative ribonuclease BN |
Protein accession | YP_001271967 |
Protein GI | 148544597 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.528846 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAAGG AATCGGGCAA GGGCAAGACT TTTATTGCGT TATTAATTCA ACATATTACA ATGGCCCAGA TTTCAAGTTC TGCTGCTGTT CTAGCTTACT ATACCTTGCT ATCTATTTTT CCTGCCGTGA TGGTAGTAGG AAATTTATTG CCGATGATTG GAATTGACGC TAAGACGATT TTAGCCTACC TCTCAACTGC AATTCCTGAA TCGGTCTATG ATTTTATCCA GCCGTTGATC TATGATTTCT TACGACGGGG GAGTGGTGGT GTTCTGACAA CCGGGGCCTT GATTGCTCTC TGGTCGACCA GTCAGGGAAT TGCCGCTTTT CAACGCAGCG TTAACCATGC CTATGGGATT GCGGAAAATC AGAATCCGGT GATGAACCGA ATCGTCTCAT TTGTTTGGAT GATTGTCCTC TTAGTAATTA TCTTTATCAT CATTATTTTA TACGGTTTTG GGGAGCAGGT TCTTAAGAGT ATTCAGCCAA TTTTTAATTT CCGGCGTGAT TACATTGCTA TCTTTAGCTC ATTAAGGTGG CCGGTAACAT TTGGCGTCTT GTTTATTGCT CTTACACTCT TGTATTACTT TGTTCCTAAT GCGAAGGTCC GGTTGCGCTA TGCACTTGCT GGTTCATTCT TGGCTTCATT GCTTTGGATG GGATTATCAC GTTTATTCTC GTTCTATACC TTATTATTTG GTCACGGGGT AATTTCCTAC AAGACAATTG GAGCTTTTAT TGCAATGATG GTATGGCTTG ACTTTTCTGG CTATATTATC ATGCTGGGGG CGGCGCTAAA TGCTGCTTTG CAAGAATGTC ATGAAGGTGA ATTGCATGCC AAGAAACACT TTTGGCAACT GGTAGAAAGA AAAAACAAAA ATGGAGGCTA G
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Protein sequence | MDKESGKGKT FIALLIQHIT MAQISSSAAV LAYYTLLSIF PAVMVVGNLL PMIGIDAKTI LAYLSTAIPE SVYDFIQPLI YDFLRRGSGG VLTTGALIAL WSTSQGIAAF QRSVNHAYGI AENQNPVMNR IVSFVWMIVL LVIIFIIIIL YGFGEQVLKS IQPIFNFRRD YIAIFSSLRW PVTFGVLFIA LTLLYYFVPN AKVRLRYALA GSFLASLLWM GLSRLFSFYT LLFGHGVISY KTIGAFIAMM VWLDFSGYII MLGAALNAAL QECHEGELHA KKHFWQLVER KNKNGG
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