Gene Lreu_1357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1357 
Symbol 
ID5188259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand+ 
Start bp1415299 
End bp1415931 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content43% 
IMG OID640591206 
ProductIS30 family transposase 
Protein accessionYP_001271944 
Protein GI148544574 
COG category[L] Replication, recombination and repair 
COG ID[COG2826] Transposase and inactivated derivatives, IS30 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTATA AACATCTTAC CACACGTGAA TTAACTCTCA TAGCTGATTT TTGGTATCAA 
GGTACTAAAG CTTATCGGGC TGCTAAATTA CTTCAGCGTA GTCAAGAAAC CATCTATCGT 
GTTTATCGTT TCCTCAACGA CGGTAAAACC ATCGACCAAT ATCTTCAGAC TTATCAGCGA 
CATAAGCGTC GTTGTGGTCG GAAGCAGACC CAACTGCCAA CTATCGAAGT TAACTATATC 
CATGCGCAAA TCAAGGCAGG TTGGACTCCT GATACTATTA TTGGTCGTCA TGAACACCCA 
ATTAGCTGCA GTATGCGCAC CCTTTATCGC ATGTTTGCCC GCAATCAGTA TGGCTTCTCC 
GTTAAACAGC TACCGATGAA AGGAAAACGC TATCCCAGTG GCTATGTGGA ACATCGTGGT 
AAAGCTGGCC AATTAGGACG CAGTATCTAT CAACGATATC GTGATTTTCC GCATTACCAA 
CATGAATTTG GGCACTTTGA AGCTGATACA GTTCAAGGTA AAGCTCACCG CGGAGCGGTA 
ATGACGCTAG TAGAGCGACA ATCCAAAGTA ATGATTGTCC TTAATATTCA TCATAAAACA 
GACGAAGCAG TGAATTGCCA GCTTGATCAA TAG
 
Protein sequence
MTYKHLTTRE LTLIADFWYQ GTKAYRAAKL LQRSQETIYR VYRFLNDGKT IDQYLQTYQR 
HKRRCGRKQT QLPTIEVNYI HAQIKAGWTP DTIIGRHEHP ISCSMRTLYR MFARNQYGFS 
VKQLPMKGKR YPSGYVEHRG KAGQLGRSIY QRYRDFPHYQ HEFGHFEADT VQGKAHRGAV 
MTLVERQSKV MIVLNIHHKT DEAVNCQLDQ