Gene Lreu_1279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1279 
Symbol 
ID5190150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand- 
Start bp1328094 
End bp1328606 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content39% 
IMG OID640591120 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_001271873 
Protein GI148544503 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.000497848 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAG CCTACCTAAG TATTGGCAGT AATATGGGCG ACCGGTTAGC GAACCTTCAA 
AAAGCGATTC AGCTGTTGAA TGTGCCACCT AAAATTGATA TTATGGCGAT TTCCTCAGTT 
TATGAAACAG AACCGGTGGG GGATGTCAAA CAAGATTCTT TTTACAATAT TGCAGTTAAG 
GTTGCGACTA AGTTAACAGC TCAGCAACTC CTCGACCACC TTCACAATAT CGAACAAGAG 
TTACATCGAC GCCGGCTTAT TCATTGGGGA CCACGGACAA TTGACCTTGA TATTATTGAT 
TTTGGTCATC AACATATCAA AACACCAACG CTAACGATCC CTCATCCAGA AATGGCTAAC 
CGGCAGTTTG TTTTATTACC AATGCGCGAA ATTACTAATC AAAATGATCC TTATTATCAA 
CAATTGGATC ATTTGTTAAA TAAGACTCCA GACCATAATT GGCTTAAAAA GATATATGGA 
CGAGAGGTGT TTTCATGGAC CAACAAAAAA TAG
 
Protein sequence
MTEAYLSIGS NMGDRLANLQ KAIQLLNVPP KIDIMAISSV YETEPVGDVK QDSFYNIAVK 
VATKLTAQQL LDHLHNIEQE LHRRRLIHWG PRTIDLDIID FGHQHIKTPT LTIPHPEMAN 
RQFVLLPMRE ITNQNDPYYQ QLDHLLNKTP DHNWLKKIYG REVFSWTNKK