Gene Lreu_1175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1175 
Symbol 
ID5190031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1230402 
End bp1230620 
Gene Length219 bp 
Protein Length72 aa 
Translation table11 
GC content37% 
IMG OID640591014 
ProductDNA-directed RNA polymerase, omega subunit 
Protein accessionYP_001271769 
Protein GI148544399 
COG category[K] Transcription 
COG ID[COG1758] DNA-directed RNA polymerase, subunit K/omega 
TIGRFAM ID[TIGR00690] DNA-directed RNA polymerase, omega subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000347215 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCTTT TTCCATCAGT TGATGAATTA TTAAAACATA TTGATTCTCG TTATTCATTA 
GTTATGCTTG CTAGTAAGCG TGCCAATGAA TTAGATGCAG GAGCTGCCCC ATTACTTGAA
CATTATGATT CAAGCAAATC AGTTGGGAAG GCCCTTGAAG AGATTTTGGC TGGAAAAGTT
ACGATCGATC CTGATCATAC TGAAGACTTA CAGGATTAA
 
Protein sequence
MILFPSVDEL LKHIDSRYSL VMLASKRANE LDAGAAPLLE HYDSSKSVGK ALEEILAGKV 
TIDPDHTEDL QD