Gene Lreu_0997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0997 
Symbol 
ID5189324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1050399 
End bp1051253 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content40% 
IMG OID640590837 
Productpatatin 
Protein accessionYP_001271595 
Protein GI148544225 
COG category[R] General function prediction only 
COG ID[COG4667] Predicted esterase of the alpha-beta hydrolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00027457 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATATA ATGCAGCATT AGTTTTAGAA GGTGGCGCAT TCCGTGGCCA ATACACTGCC 
GGAATTGTTG ATACATTTCT CGCTCACCAT ATTGAATTTC GAAGTGTAAT GGGCGTTTCT
GCGGGTTCGC TTTGTGGAGT TAATTTCGTC TCTAAGCAAT ATGGACGCGC TGCCAATATT
AATATTAATC ATCGGCACGA TCGTCAATAT ATCTCGATGG CTCGCGTATT TAAAAAGCAA
ATAATCAATC TTGATTATCT TTTTGAGGAT CACGGATATT CTTGGCAGAA TTTTAACGAG
GCAGCTTATC GGCGTTCAGC ATCTCATTTC ACAGCAGTCG CTACTTCTGT GAAAACAGGA
AAAACAGTTT TGTTTACGGA TCCTGTTGGT GAGGAACTAA CCAATGCCCT CAAAGCTTCT
TCTTCGATGC CCTTTCTTTC AGATCCACAG GAAACATCCC AAGGGCCTTG CCTTGATGGC
GGGATTACAG ATTCTATTCC ATTTGATATT GCCCAACAAC AAGGATATGA CAAAATTGTT
GTTGTCCGGA CCAGAGATGT TAATTACCGG AAGAAGCCAT CCAGTTCTGC TGTAAAGAAG
TTATATAACA TGGTATATAA AGATTATCCT GAATTTGCTA AAGCAGGGAT CGATCGTCCC
CTTCTCTACA ACCAACAGAT TGCTGAAATC AATCGCCTAG CTCGTGAAGG AAGGATCTTT
AATATCGCTC CCTCTAAACC AATCAAGATT AAACGGATTG AAGGAAATAT TAAGAAGATT
CGAGCACTTT ACGAAACTGG TCGGAAAGAA GGAGAAAAAA TAGTTCCTAC TTTAGTTGAT
TACCTCACAA ACTAA
 
Protein sequence
MLYNAALVLE GGAFRGQYTA GIVDTFLAHH IEFRSVMGVS AGSLCGVNFV SKQYGRAANI 
NINHRHDRQY ISMARVFKKQ IINLDYLFED HGYSWQNFNE AAYRRSASHF TAVATSVKTG
KTVLFTDPVG EELTNALKAS SSMPFLSDPQ ETSQGPCLDG GITDSIPFDI AQQQGYDKIV
VVRTRDVNYR KKPSSSAVKK LYNMVYKDYP EFAKAGIDRP LLYNQQIAEI NRLAREGRIF
NIAPSKPIKI KRIEGNIKKI RALYETGRKE GEKIVPTLVD YLTN