Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0906 |
Symbol | |
ID | 5190017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 961011 |
End bp | 961751 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640590738 |
Product | LrgB family protein |
Protein accession | YP_001271506 |
Protein GI | 148544136 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1346] Putative effector of murein hydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTAATG TATTTATTAC CAATCTAGCG TTACCTTTTA CCGGGGTATT CATTTCATTG CTGGTTTACT TAATTGGGAT GTGGCTTTTC AAAATTAGTA ATGGCTTCTT CCTTTTCACC CCATTGTTAG TAGGGATGGT ATTAGGGATT GTAATTTTGG CAATCTGGGC CAAAGTCGCC AATTCAACTA CTGCTGCGGT TTACAAGAAA TTTTACCAAC CGGGTGGAAA CTTAATTTTT TGGTTTTTGA ATCCAGCAAC AATGGCATTT GCGATTCCGC TCTATCGCCG GAATGATGTT TTTAAGAAAT ATTGGGTCGA TGTAATTCTC ACATTATTTG TGGGTGGATT CATTTCATTA TTTTTGATTC AAGGAACAGC TAAATTATTT GCTCTTTCCC GTGTTTCAAC CGCCGCTATG CTTCCTCAAG CAGCTACTAC CGCTGTTGCG ATGCCAATTG CAAAGGGAAT CGGTGGTGAT CCTGCGGTAA CAGCGATGGC ATGTATCTTA AATGCAGTTA TTATTTATGC CCTTGCCGAA TTCCTGATTA AGGTCTTTAG ACTAAAGAAA ATTTCTAAGG TCGGAACTGG TCTTGGTCTT GGATCCGCTG GTCACACTGT TGGATCTGCT AAGGCGGTTC AACTAGGGTC AATTCAGGGA GCAATGGCCG CAGTGGCAGT TGTTATCGTT TCATTAGCAA TGGACATTTT GGTTCCTATT TATGCTCATC TTTTTATGTA A
|
Protein sequence | MTNVFITNLA LPFTGVFISL LVYLIGMWLF KISNGFFLFT PLLVGMVLGI VILAIWAKVA NSTTAAVYKK FYQPGGNLIF WFLNPATMAF AIPLYRRNDV FKKYWVDVIL TLFVGGFISL FLIQGTAKLF ALSRVSTAAM LPQAATTAVA MPIAKGIGGD PAVTAMACIL NAVIIYALAE FLIKVFRLKK ISKVGTGLGL GSAGHTVGSA KAVQLGSIQG AMAAVAVVIV SLAMDILVPI YAHLFM
|
| |