Gene Lreu_0906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0906 
Symbol 
ID5190017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp961011 
End bp961751 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content41% 
IMG OID640590738 
ProductLrgB family protein 
Protein accessionYP_001271506 
Protein GI148544136 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1346] Putative effector of murein hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAATG TATTTATTAC CAATCTAGCG TTACCTTTTA CCGGGGTATT CATTTCATTG 
CTGGTTTACT TAATTGGGAT GTGGCTTTTC AAAATTAGTA ATGGCTTCTT CCTTTTCACC
CCATTGTTAG TAGGGATGGT ATTAGGGATT GTAATTTTGG CAATCTGGGC CAAAGTCGCC
AATTCAACTA CTGCTGCGGT TTACAAGAAA TTTTACCAAC CGGGTGGAAA CTTAATTTTT
TGGTTTTTGA ATCCAGCAAC AATGGCATTT GCGATTCCGC TCTATCGCCG GAATGATGTT
TTTAAGAAAT ATTGGGTCGA TGTAATTCTC ACATTATTTG TGGGTGGATT CATTTCATTA
TTTTTGATTC AAGGAACAGC TAAATTATTT GCTCTTTCCC GTGTTTCAAC CGCCGCTATG
CTTCCTCAAG CAGCTACTAC CGCTGTTGCG ATGCCAATTG CAAAGGGAAT CGGTGGTGAT
CCTGCGGTAA CAGCGATGGC ATGTATCTTA AATGCAGTTA TTATTTATGC CCTTGCCGAA
TTCCTGATTA AGGTCTTTAG ACTAAAGAAA ATTTCTAAGG TCGGAACTGG TCTTGGTCTT
GGATCCGCTG GTCACACTGT TGGATCTGCT AAGGCGGTTC AACTAGGGTC AATTCAGGGA
GCAATGGCCG CAGTGGCAGT TGTTATCGTT TCATTAGCAA TGGACATTTT GGTTCCTATT
TATGCTCATC TTTTTATGTA A
 
Protein sequence
MTNVFITNLA LPFTGVFISL LVYLIGMWLF KISNGFFLFT PLLVGMVLGI VILAIWAKVA 
NSTTAAVYKK FYQPGGNLIF WFLNPATMAF AIPLYRRNDV FKKYWVDVIL TLFVGGFISL
FLIQGTAKLF ALSRVSTAAM LPQAATTAVA MPIAKGIGGD PAVTAMACIL NAVIIYALAE
FLIKVFRLKK ISKVGTGLGL GSAGHTVGSA KAVQLGSIQG AMAAVAVVIV SLAMDILVPI
YAHLFM