Gene Lreu_0706 details

Gene Information

• Locus tag: Lreu_0706
• Symbol: dnaK
• ID: 5189643
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactobacillus reuteri DSM 20016
• Kingdom: Bacteria
• Replicon accession: NC_009513
• Strand: +
• Start bp: 772674
• End bp: 774539
• Gene Length: 1866 bp
• Protein Length: 621 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 640590540
• Product: molecular chaperone DnaK
• Protein accession: YP_001271308
• Protein GI: 148543938
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0162931
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAGTA ATAAGATTAT TGGTATTGAT TTAGGTACTA CTAACTCTGC GGTTGCTGTT 
ATGGAAGGTA ATGAACCTAA GATTATCACC AACCCAGAAG GAAGTCGGAC AACACCATCT 
GTTGTTTCAT TTAAGAATGG TGAAACTCAA GTTGGGGAAG TAGCAAAGCG TCAAGCAATT 
ACTAATCCTA ACACTATTTC ATCAATCAAG AGTCACATGG GTGAAGCAGG ATACACTGTT 
GAAGTTGATG GTAAGAAATA TACTCCACAA GAAATTTCAG CAATGATTTT GCAATACCTT 
AAGAAATATG CTGAAGACTA CATTGGTGAT ACTGTTACTC AAGCAGTTAT CACTGTTCCT 
GCATACTTCA ACGATGCTCA ACGTCAAGCT ACTAAGGATG CCGGTAAAAT TGCGGGCCTT 
GATGTAAAGC GGATTATTAA CGAACCTACT GCTTCATCCC TAGCATACGG TCTTGACAAA 
AAGGACAAAG ATGAAAAGAT CCTTGTTTAT GACCTTGGTG GTGGTACATT CGATGTTTCC 
ATTCTTGAAT TAGGTGACGG TGTCTTCCAA GTTCTCTCTA CTAATGGTGA TACTCATTTA 
GGTGGGGATG ACTTTGACCA AAAGATTATG GATTGGTTAA TCGATGGCTT TAAGGAAGAA 
CACGGTGTTG ATCTTTCTCA AGATAAGATG GCGCTTCAAC GTTTGAAGGA TGCTGCTGAA 
AAGGCTAAGA AGGACTTGTC TGGTGTTCAA GAAGCACAAA TCAGCTTACC ATTTATTTCA 
GCTGGTGAAA ACGGCCCATT ACACTTGGAA AAGACATTAA GTCGGGCACA ATTTAACCAA 
TTAACTAACG ATTTGGTTGA GCGGACAAAG CAACCGGTAT TGAATGCTTT GAAAGATGCT 
GATCTTACTT TTGATGACAT TGATGAAGTT ATCTTAAATG GTGGATCTAC TCGTATTCCT 
GCCGTTCAAG AAATGGTTAA GGAATTAACT GGTAAGGAAC CTAACCACTC AATTAATCCT 
GACGAAGCCG TTGCTCTTGG TGCAGCTATT CAAGGTGGGG TTCTTACTGG TGATGTTAAG 
GATGTCGTAT TACTTGATGT TACTCCACTT TCACTTGGTA TTGAAACCAT GGGTGGTGTC 
TTCACTAAGT TGATTGACCG TAACACAACT ATTCCTACTT CAAAGAGCCA AATCTTCTCA 
ACTGCTGCTG ATAACCAACC AGCTGTTGAC ATTCACGTTC TTCAAGGTGA ACGTCCAATG 
GCAGCAGATA ATAAGACTTT GGGTAACTTC CAACTAACTG ATATTCCTGC TGCTCCTCGT 
GGTGTTCCTC AAATCAAAGT TACATTTGAT ATCGATAAGA ACGGTATTGT TAATGTTTCT 
GCTGAAGATC AAGGAACTCA TAAGAAGCAA AACATCACTA TCAAGTCTAA CTCAGGCTTA 
AGTGATGAAG AAATTGAACG GATGAAGAAG GATGCTGAAG AGCATGCTGA AGCCGACAAG 
AAGAAGAAGG AAGAAGTTGA CTTGAAGAAT GAAGTTGACC AAGAACTCTT CCAAGTTGAT 
AAGACTTTGA AGGAAGTTAA GGGTAAAGTT CCTGAAGATG ATATCAAGAA GGCTGAAAGT 
GCTCGTGACG AATTAAAGAA GGCTAAAGAA AGCGGCAACC TTGATGAAAT GAAAGCTAAG 
AAGGATGCTT TGAACAAAGT TATTCAAGAC CTTAGCGTAA AGCTTTACCA ACAAGCTCAA 
GGTGCACAAG GTGGCGCTGC TAATGGTCAA CCTGGTGATA GCCAACAAAA TGGTAATGAC 
AACGGTAATG ATGACAATAC TGTTGATGGT GATTTTAAGG ACGTTACACC AGACGACAAG 
AAATAG 

 

Protein sequence

MASNKIIGID LGTTNSAVAV MEGNEPKIIT NPEGSRTTPS VVSFKNGETQ VGEVAKRQAI 
TNPNTISSIK SHMGEAGYTV EVDGKKYTPQ EISAMILQYL KKYAEDYIGD TVTQAVITVP 
AYFNDAQRQA TKDAGKIAGL DVKRIINEPT ASSLAYGLDK KDKDEKILVY DLGGGTFDVS 
ILELGDGVFQ VLSTNGDTHL GGDDFDQKIM DWLIDGFKEE HGVDLSQDKM ALQRLKDAAE 
KAKKDLSGVQ EAQISLPFIS AGENGPLHLE KTLSRAQFNQ LTNDLVERTK QPVLNALKDA 
DLTFDDIDEV ILNGGSTRIP AVQEMVKELT GKEPNHSINP DEAVALGAAI QGGVLTGDVK 
DVVLLDVTPL SLGIETMGGV FTKLIDRNTT IPTSKSQIFS TAADNQPAVD IHVLQGERPM 
AADNKTLGNF QLTDIPAAPR GVPQIKVTFD IDKNGIVNVS AEDQGTHKKQ NITIKSNSGL 
SDEEIERMKK DAEEHAEADK KKKEEVDLKN EVDQELFQVD KTLKEVKGKV PEDDIKKAES 
ARDELKKAKE SGNLDEMKAK KDALNKVIQD LSVKLYQQAQ GAQGGAANGQ PGDSQQNGND 
NGNDDNTVDG DFKDVTPDDK K