Gene Lreu_0675 details

Gene Information

• Locus tag: Lreu_0675
• ID: 5189708
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactobacillus reuteri DSM 20016
• Kingdom: Bacteria
• Replicon accession: NC_009513
• Strand: +
• Start bp: 742062
• End bp: 742730
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 640590509
• Product: RNase HI
• Protein accession: YP_001271277
• Protein GI: 148543907
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0328] Ribonuclease HI

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.00564267
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTAAAAA AATATTATGC AGTCAAAAAA GGTCGTCATC CGGGAATATA TAAAACTTGG 
GCTGAATGTC AGAAGGAAGT TAATGGATAT CCAAATGCTA AGTTCAAAAG TTTTTTAACA 
CTTAAAGGTG CTAATGAATG GCTTCAGGCT ACGGGAAATA CCGTGCCCTC GACTAAAGCA 
GTTGATCATT CTGATAATAT TCTTGTTTAT ACTGATGGAG GCTCCCGTAA TCATGGCAAT 
AAGTTGGGGC AGCATGTTAA GGCAGATGAT AAAGCAGCTT GGGCTTATTT TATTCAAACT 
AAAGATCAAG CTTATACAGG AACGGCTGGC GAATTCGGGG CTACTAATAA TAAAATGGAG 
ATTACAGCTT TAATCCAAGC GTTAACTAAA CTATTAGAAC TTGGCCTCCA AGATCAACCA 
ATTACAGCGA TTTTGGATTC ACATTACGTA CTAGACCCAA TTATGAAAGG CTGGTTAACT 
AATTGGCAAC GGCGGGGATG GTTAACTGCT AGTGGCAAGC CGGTAGCAAA TCAGAAGCTA 
TGGGAAGAAA TAGTTACCCT TTTACCTCAA TTCCCTAATT TACATTTTGA TTGGACTAAG 
GGTCATGCAA CGAATGCTGG AAATAATAAG GTCGATGAAT TACTAAATAA AACGATGGAT 
CAGTTATAA 

 

Protein sequence

MVKKYYAVKK GRHPGIYKTW AECQKEVNGY PNAKFKSFLT LKGANEWLQA TGNTVPSTKA 
VDHSDNILVY TDGGSRNHGN KLGQHVKADD KAAWAYFIQT KDQAYTGTAG EFGATNNKME 
ITALIQALTK LLELGLQDQP ITAILDSHYV LDPIMKGWLT NWQRRGWLTA SGKPVANQKL 
WEEIVTLLPQ FPNLHFDWTK GHATNAGNNK VDELLNKTMD QL