| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0612 |
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| Symbol | |
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| ID | 5188944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 682438 |
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| End bp | 683748 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640590447 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001271216 |
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| Protein GI | 148543846 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.239326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAAC AAATTTCTGA TCAACAAATA AACGCTGCTG GTCACCTAAC AATTGGGGGA
TGTGATGCAG TTGATTTAGC TCACCGGTTT GGTACCCCGT TAGTTGTTTA TGATGTTCAA
CAGATTCGTA ACCAGATCCG AGCATTTAAG CAGGTTTTTG AAGAAAACAG TGTTGATTAT
GCAGTTAGCT ATGCAAGTAA AGCTTTTTCA GCAATCGCAA TGTATCAAGT AGTTGCTGCA
GAAGGTGCGC ATGTTGATGT TGTTTCTGGT GGTGAATTGT ATACGGCAAT CAAAGCGGGC
TTTCCAATGG CTAATGTTAG TTTTCACGGG AATAATAAAT CACGGGAAGA ATTGGAAATG
GCAATTGACC ATCACGTGGG AACAATCATG ATTGATAACT TCCATGAGAT TGAATTGCTG
GCAGACGTTT TGGAAGAGCA TGATGCGCAT GTTGATGTGA TGTTGCGAAT TACTCCTGGA
ATTTCTGCTC ATACAAATAA GTACATTCAA ACTGGTCAAG TTGACAGTAA ATTTGGATTT
GACCTTCAAT CAGGACAGGC AGATGAGGCG TTAACAAAAG TTCTTGAAAA TCCCCGGATG
CAAATGAAAG GATTGCATGC CCATATTGGT TCACAGATTT TTGAACTTGC GGGATTTGAA
GGAGTAGCTA AGAAGTTAGT TGAAGTTGCC GCCCACTGGC AAGAAAAATT CAACTACCAA
GCTGCTGTGA TCAACGTTGG AGGTGGCTTT GGAATTCGTT ATGTAAAAGA TGATACACCA
CTTGCTCCAG AAGAATTTGT GGCAGCAATT ATTAAGGCCA TCAAAACTGA AATTAAAGAA
ACAAACCTTG CCATGCCGGC AATCTGGATA GAACCAGGAC GCTCAATCGC GGGGCCTGCT
GGCTATAATC TTTATACTGT TGGATCACGT AAAGATGTAC CAGGATTGAA GCCATATGTA
ACAGTTGATG GCGGGATGGG CGATAACATT CGTCCAGCAC TTTATGAAGC ACAATATGAA
ACGGTCTTAG CAAATAATCC TCGGGCGGAA TTGGTTGAAC ATGTTCGGGT GGCAGGAAAG
TATTGCGAGT CTGGTGATAT CCTTAGTCAG AATCAGGCAT TACCGGCTAC GAAACCAGGG
GATGTCTTGG CAATGCTTGA TACTGGTGCT TATGGCTATT CAATGGCTTC AAATTATAAT
CGGAATCCTC GTCCAGCAGT TGTCTTTGCA GAAAAAGGCA CAGCCCAGGT TGTAATTAAA
CGAGAAACTT ACGATGATTT AATTCATTTG GATGAACCAT ACCAACAATA A
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| Protein sequence | MNEQISDQQI NAAGHLTIGG CDAVDLAHRF GTPLVVYDVQ QIRNQIRAFK QVFEENSVDY
AVSYASKAFS AIAMYQVVAA EGAHVDVVSG GELYTAIKAG FPMANVSFHG NNKSREELEM
AIDHHVGTIM IDNFHEIELL ADVLEEHDAH VDVMLRITPG ISAHTNKYIQ TGQVDSKFGF
DLQSGQADEA LTKVLENPRM QMKGLHAHIG SQIFELAGFE GVAKKLVEVA AHWQEKFNYQ
AAVINVGGGF GIRYVKDDTP LAPEEFVAAI IKAIKTEIKE TNLAMPAIWI EPGRSIAGPA
GYNLYTVGSR KDVPGLKPYV TVDGGMGDNI RPALYEAQYE TVLANNPRAE LVEHVRVAGK
YCESGDILSQ NQALPATKPG DVLAMLDTGA YGYSMASNYN RNPRPAVVFA EKGTAQVVIK
RETYDDLIHL DEPYQQ
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