Gene Lreu_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0562 
Symbol 
ID5188725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp621153 
End bp621698 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content37% 
IMG OID640590369 
Producthypothetical protein 
Protein accessionYP_001271167 
Protein GI148543797 
COG category[S] Function unknown 
COG ID[COG4470] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.994142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGAG CTAAGATCCA AGATTATATT GATCAGCGTG AAGAGCAGCG TTCTTTAATC 
TATCATATTG AAGAAAAAGA TCAGACACAT TTTACCATTA ATGGACATCC CTACGAATTA
GTAAAGGATT ACCGTGATGG TTTTAATTCA GAAAAATTCG CAGAACGGTT TAGTAGTGTC
CTAAGTAAAT ATGACTATAT CGTTGGCGAT TGGGGATATG ACCAATTACG CTTAAAAGGT
TTTTATGATG ATGATAATCC CTTATTTGAA CCAGAATTGG GCACTGATAC GATTGAAGAT
TATTTATTTG AATATTGTAA TTTTGGCTGT GCGTATTTTA TTGTTCACAA CGATGATGTT
AGTATTCCAC GGCAACATGG ACACAGTCAT CGTCAACGGC GAAAGAAAAC TACGCCAATC
ATTCATGAAC GGCGGCGACA AGTTAAGCAA CCGAACGTGC GTCAACGGCA AAATCAGCGT
GCAGAACGTG TAAAAAACGG TCATCGTCAA AAATTTGTGA TTCATCAACG AAAAAAGAGG
AGTTAA
 
Protein sequence
MNRAKIQDYI DQREEQRSLI YHIEEKDQTH FTINGHPYEL VKDYRDGFNS EKFAERFSSV 
LSKYDYIVGD WGYDQLRLKG FYDDDNPLFE PELGTDTIED YLFEYCNFGC AYFIVHNDDV
SIPRQHGHSH RQRRKKTTPI IHERRRQVKQ PNVRQRQNQR AERVKNGHRQ KFVIHQRKKR
S