Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0562 |
Symbol | |
ID | 5188725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 621153 |
End bp | 621698 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640590369 |
Product | hypothetical protein |
Protein accession | YP_001271167 |
Protein GI | 148543797 |
COG category | [S] Function unknown |
COG ID | [COG4470] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.994142 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCGAG CTAAGATCCA AGATTATATT GATCAGCGTG AAGAGCAGCG TTCTTTAATC TATCATATTG AAGAAAAAGA TCAGACACAT TTTACCATTA ATGGACATCC CTACGAATTA GTAAAGGATT ACCGTGATGG TTTTAATTCA GAAAAATTCG CAGAACGGTT TAGTAGTGTC CTAAGTAAAT ATGACTATAT CGTTGGCGAT TGGGGATATG ACCAATTACG CTTAAAAGGT TTTTATGATG ATGATAATCC CTTATTTGAA CCAGAATTGG GCACTGATAC GATTGAAGAT TATTTATTTG AATATTGTAA TTTTGGCTGT GCGTATTTTA TTGTTCACAA CGATGATGTT AGTATTCCAC GGCAACATGG ACACAGTCAT CGTCAACGGC GAAAGAAAAC TACGCCAATC ATTCATGAAC GGCGGCGACA AGTTAAGCAA CCGAACGTGC GTCAACGGCA AAATCAGCGT GCAGAACGTG TAAAAAACGG TCATCGTCAA AAATTTGTGA TTCATCAACG AAAAAAGAGG AGTTAA
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Protein sequence | MNRAKIQDYI DQREEQRSLI YHIEEKDQTH FTINGHPYEL VKDYRDGFNS EKFAERFSSV LSKYDYIVGD WGYDQLRLKG FYDDDNPLFE PELGTDTIED YLFEYCNFGC AYFIVHNDDV SIPRQHGHSH RQRRKKTTPI IHERRRQVKQ PNVRQRQNQR AERVKNGHRQ KFVIHQRKKR S
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