Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0480 |
Symbol | |
ID | 5190036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 534355 |
End bp | 535977 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640590287 |
Product | carbohydrate kinase, FGGY |
Protein accession | YP_001271085 |
Protein GI | 148543715 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.50905 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAC GTGAAACAGC GACACAAGTA AAAAATGGTC AGGCTTCACT AGGAATTGAG TTAGGCTCTA CCCGAATTAA AGCAGTCTTG ATTAATCCAG ATTTTGAAAC TATTTCTTCT GGGAGTTATA CCTGGGAAAA TCAATTGAAA GACGGAATCT GGACATACCC GCTGGATCAA GTTTGGGAAG GAATTCAAGC TGCTTATGCC AAGATTAAGG CAGATGTCCA AAGTAAGTAC CATGTGAGCT TGGATGAAAT TAGTTCAATC GGTGTCAGTG CCATGATGCA TGGGTACCTA CCATTTGATA AAAACAACCA ATTACTTGTT CCATTTAGAA CCTGGCGGAA TAACATCACT GAAGAATCCG CAGATAAATT AACTGATTTA TTTGATTTTA ATATTCCACA GCGATGGAGT ATTGCTCACC TCTACCAAGC AATTTTAAAC AAGGAACCGC ATGTTAAAGA TGTTGATTTT ATTACAACTT TAGCTGGCTA TGTTCACTGG AAACTTTCGG GTGAAAAAGT TTTAGGAATT GGGGATGCTT CAGGAGTATT TCCAATCGAT GATCAAACAT TAACTTATCG TCAAGACTTT ATTGAAAAAT TCAACTCATT ACCAGAAGTT GAACAATACC CATGGCAACT TAAGAATATT TTGCCCGCAG TCCTGGTAGC TGGACGCGAT GCAGGTCACT TAACTGCTGA TGGAGCAAAA TTACTTGATC CAAGTGGAAC TTTACAAGCC GGTAGTTTGA TGGCACCTCC AGAAGGGGAT GCAGGAACTG GAATGGTTGG AACTAACAGT GTTCGAAAAC GGACAGGAAA TATTTCAGTT GGAACTTCAG CCTTCTCAAT GAATGTGTTG GATGCTCCAT TAAAGAAACT CCACCGTGAT ATTGATATTG TTACTACGCC AACCGGTGAT CCAGTAGCCA TGGTTCATAT CAATAATTGT TCCTCAGATA TCAACGCTTG GGTTGGATTA TTTAGGGATT TTGCTAATGC AATTGGAGCC AAGATCGATA CTAATACGCT TTACGAGACC CTATTTGATT CAACGGTTCA TTCCGACCCA GATGCTGGTG GATTGATTAA TTATAGTTAT CTTTCTGGTG AAAATATTAC CAAGATTCAA GAAGGCCGTC CCTTATTTGT CCGTACTCCA AATAGTAAGA TGAACCTCGC CAACTTCTTC CTTACTCAAC TCTATGCAGC ATTTGCGCCA TTGAAGATTG GGATGGATAT CTTACTAAAT GAAGAACACG TTCAAACCGA TGTCATGGTT GCGCAAGGAG GACTCTTCGG GACACCAGTT ATTGGGCAAC AAGTTTTGGC GAATGCCTTA AATATCCCAA TTACAATCAT GAATACTGCC AGTGAAGGTG GACCATGGGG AATGGCAGTC CTTGCTAAGT ATGCTGAGAC TTACGGAAAA GAATCCCTAG CAGATTACCT TGACGAAAAA GTCTTTAAGA ATCCAGAAAG TATGACTCTT ACACCAGAAT CTGCTGGCGT AAAAGGATAT GAAAGCTTTA TTACTCGTTA CCAAGCAGGC TTACCTGTTG AAGCATTAGC TGGTGATGAC ATTAAAGAAC GTGAAGAGAA AGGGAGTAAA TAG
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Protein sequence | MNLRETATQV KNGQASLGIE LGSTRIKAVL INPDFETISS GSYTWENQLK DGIWTYPLDQ VWEGIQAAYA KIKADVQSKY HVSLDEISSI GVSAMMHGYL PFDKNNQLLV PFRTWRNNIT EESADKLTDL FDFNIPQRWS IAHLYQAILN KEPHVKDVDF ITTLAGYVHW KLSGEKVLGI GDASGVFPID DQTLTYRQDF IEKFNSLPEV EQYPWQLKNI LPAVLVAGRD AGHLTADGAK LLDPSGTLQA GSLMAPPEGD AGTGMVGTNS VRKRTGNISV GTSAFSMNVL DAPLKKLHRD IDIVTTPTGD PVAMVHINNC SSDINAWVGL FRDFANAIGA KIDTNTLYET LFDSTVHSDP DAGGLINYSY LSGENITKIQ EGRPLFVRTP NSKMNLANFF LTQLYAAFAP LKIGMDILLN EEHVQTDVMV AQGGLFGTPV IGQQVLANAL NIPITIMNTA SEGGPWGMAV LAKYAETYGK ESLADYLDEK VFKNPESMTL TPESAGVKGY ESFITRYQAG LPVEALAGDD IKEREEKGSK
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