Gene Lreu_0458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0458 
Symbol 
ID5189631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp513348 
End bp514463 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content38% 
IMG OID640590265 
ProductYibE/F family protein 
Protein accessionYP_001271063 
Protein GI148543693 
COG category[S] Function unknown 
COG ID[COG5438] Predicted multitransmembrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000650445 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTAAGC AATACTGGAC AAAGCAAAGA ATCTGGTTGT TAATTTTTTT AGTGGTTGTT 
GGAATTGGTG CTCTCTTATT TACCAGCCAT AATGAACAGT TTTATCAACA ACCAATTGCT
AAAGTAATCA GCGAAAAAAC GGTGAATAGG CAAAGGGTAA AAGACCAGTT TGATAATGTT
GACCATCAAT ATAATCAACA ACTCCAAGTA AAACTAATGA ATGGTAAATA TCGTGGGCAA
GAATTAACAG TCCAAAATAC ATATAGCGAT TCGCAACCGA TGGATCAACG TTATCGGGCA
GGGAATGAAG TGTTTTTAAC CCAGCTTCGT AAACGAGGCG GAAAACTAAC CGCCAATGTT
AACGGTTATA AGCGGGACAC AGTAATCGTC TTTTTACTTT GGCTTGTTGT CTTGATGCTG
CTTCTCCTTA TGGGACGTTC AGGGCTGTTT GCATTCTTAA GCGTAGTAAT TAATGCTCTT
TTGTTTATAA TTGCAATTGA GATTGACTTA AAGCAAAATG GTCAGCATAT CATGCTGCTT
TTTAGTGTTC TTGCCATAAT TTTTACGTTT ATTAGTTTAT TATTAGTTCT TGGTTTTAGT
AAAAGGATGC TGGCGACTTT TGCGGCAACA GTTATTGGAA CATTTGTTGC CTTGGGAGTA
AGTATGCTTG TATTTATGTG GACGCATGAA CGGGGGATTT ACTATGAATC AATGGAATAT
GTTACGCAAG TTCCTCGACC GCTTTTTTTA GCTGAAACAT TGTTGGGGTC TTTAGGAGCA
GTAATGGATG AATCAAGCGA TATTATCGCC ACTCTTTTTG AGTTAAAACA GCTAAATCCC
GCTGTTACCC GCAAACAGTT ATTTATCTCT GGGCGTAATG TTGGTAAATC AATTATGGGA
CCGTTAATAA ATGTTTTGTT TTTAATTTTT ATGGTGGATA CCTTTACCGG TAGTCTTTTG
TATATCAAAA ACGGCAACTC ATGGGGATAT ACTTATGCAA TGAATATGAG CTTAGGGACT
ATTCAGAGCC TGATCAGTGG GATTGGAATT GTCCTTTCAG TTCCCCTTGT CAGTCTATTT
GGGGCATTAT TATTAGGGAA GAAGGTGCAA AGATGA
 
Protein sequence
MIKQYWTKQR IWLLIFLVVV GIGALLFTSH NEQFYQQPIA KVISEKTVNR QRVKDQFDNV 
DHQYNQQLQV KLMNGKYRGQ ELTVQNTYSD SQPMDQRYRA GNEVFLTQLR KRGGKLTANV
NGYKRDTVIV FLLWLVVLML LLLMGRSGLF AFLSVVINAL LFIIAIEIDL KQNGQHIMLL
FSVLAIIFTF ISLLLVLGFS KRMLATFAAT VIGTFVALGV SMLVFMWTHE RGIYYESMEY
VTQVPRPLFL AETLLGSLGA VMDESSDIIA TLFELKQLNP AVTRKQLFIS GRNVGKSIMG
PLINVLFLIF MVDTFTGSLL YIKNGNSWGY TYAMNMSLGT IQSLISGIGI VLSVPLVSLF
GALLLGKKVQ R