Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0295 |
Symbol | |
ID | 5190023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 344022 |
End bp | 344771 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640590100 |
Product | ABC transporter related |
Protein accession | YP_001270902 |
Protein GI | 148543532 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.852806 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAA CAAATATTAA TAAAAGTTTT GGTAATAAAA ATGTCTTGAA AAATACCACG TTAGAGTTTC CTGCAGGTAA AACAACAGTA ATGGTTGGTC CATCTGGATC TGGTAAATCA ACAATTCTCC GCTCACTTAA CTTATTGGTA ATGCCAGAGA GCGGCCAGTA CGATTTTGAT GATCATCATT TGGATTTTAG TCAAAAAGTA AGTAATAAAG ATAAGTTGGC AATTCGTCAA GAAACAGGGA TGGTTTTCCA AGACTACAAT CTTTTTCCTA ATAAAACTGT CCTTGGTAAC ATTATTGAAG GACCAACACA GGTTTTGAAA CAGACGAAAA AGGAAGCAAT TGCAAACGCG CATAATTTAC TTGCTAAAGT GGGCTTAGCA GATTATGGAG AAGCCTATCC GAATGAATTA TCTGGCGGAC AGGCACAGCG GGTGGCGATT GCCCGAGCAT TAGCAATGTC ACCAAAGTAT ATCCTACTTG ATGAACCGAC TTCTGCCCTT GATCCAGAAT TAGAGCTTAG TGTGTTGAAG GTTCTGTTGC AATTAGCTGA AGAAAAACAA TCAATGGTAA TTGTTACTCA TAATATGGTC TTTGCGAAAC ATGTTGCGGA TAAGATTATT TTTGTCGAGA ACGGTGAAAT TTTATATGAT GGTACTCCAG ACGAGTTTTT TGCTCCAGAT AATCCAAATA AACGAATTAA GAACTTTATC GCCTCAATGA CAATGGAAAA TTTAAAATAA
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Protein sequence | MKLTNINKSF GNKNVLKNTT LEFPAGKTTV MVGPSGSGKS TILRSLNLLV MPESGQYDFD DHHLDFSQKV SNKDKLAIRQ ETGMVFQDYN LFPNKTVLGN IIEGPTQVLK QTKKEAIANA HNLLAKVGLA DYGEAYPNEL SGGQAQRVAI ARALAMSPKY ILLDEPTSAL DPELELSVLK VLLQLAEEKQ SMVIVTHNMV FAKHVADKII FVENGEILYD GTPDEFFAPD NPNKRIKNFI ASMTMENLK
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