Gene Lreu_0295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0295 
Symbol 
ID5190023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp344022 
End bp344771 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content37% 
IMG OID640590100 
ProductABC transporter related 
Protein accessionYP_001270902 
Protein GI148543532 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.852806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAA CAAATATTAA TAAAAGTTTT GGTAATAAAA ATGTCTTGAA AAATACCACG 
TTAGAGTTTC CTGCAGGTAA AACAACAGTA ATGGTTGGTC CATCTGGATC TGGTAAATCA
ACAATTCTCC GCTCACTTAA CTTATTGGTA ATGCCAGAGA GCGGCCAGTA CGATTTTGAT
GATCATCATT TGGATTTTAG TCAAAAAGTA AGTAATAAAG ATAAGTTGGC AATTCGTCAA
GAAACAGGGA TGGTTTTCCA AGACTACAAT CTTTTTCCTA ATAAAACTGT CCTTGGTAAC
ATTATTGAAG GACCAACACA GGTTTTGAAA CAGACGAAAA AGGAAGCAAT TGCAAACGCG
CATAATTTAC TTGCTAAAGT GGGCTTAGCA GATTATGGAG AAGCCTATCC GAATGAATTA
TCTGGCGGAC AGGCACAGCG GGTGGCGATT GCCCGAGCAT TAGCAATGTC ACCAAAGTAT
ATCCTACTTG ATGAACCGAC TTCTGCCCTT GATCCAGAAT TAGAGCTTAG TGTGTTGAAG
GTTCTGTTGC AATTAGCTGA AGAAAAACAA TCAATGGTAA TTGTTACTCA TAATATGGTC
TTTGCGAAAC ATGTTGCGGA TAAGATTATT TTTGTCGAGA ACGGTGAAAT TTTATATGAT
GGTACTCCAG ACGAGTTTTT TGCTCCAGAT AATCCAAATA AACGAATTAA GAACTTTATC
GCCTCAATGA CAATGGAAAA TTTAAAATAA
 
Protein sequence
MKLTNINKSF GNKNVLKNTT LEFPAGKTTV MVGPSGSGKS TILRSLNLLV MPESGQYDFD 
DHHLDFSQKV SNKDKLAIRQ ETGMVFQDYN LFPNKTVLGN IIEGPTQVLK QTKKEAIANA
HNLLAKVGLA DYGEAYPNEL SGGQAQRVAI ARALAMSPKY ILLDEPTSAL DPELELSVLK
VLLQLAEEKQ SMVIVTHNMV FAKHVADKII FVENGEILYD GTPDEFFAPD NPNKRIKNFI
ASMTMENLK