Gene Lreu_0217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0217 
Symbol 
ID5188773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand+ 
Start bp252272 
End bp252943 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content41% 
IMG OID640590013 
ProductABC transporter related 
Protein accessionYP_001270824 
Protein GI148543454 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0000121534 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTTG TATCAGTTGA TGATTTAACG ATCGCTTATG GAAATCATAC TGTAATCGAT 
CATTTAAGCT TCTCCATTAA TGAAGGGGAT TTTCTTGTCG TGGTTGGTGA AAATGGGGTA 
GGAAAAACGA CTCTTGTTCG CTCAATGCTT GGTTTTTTAA AACCGAAAAG CGGGACAATA 
ACTATTCCGC AAAGTACACG ACTTGGCTAC GTTCCTCAGT TTCGTAATAT TGACGAGGAA 
TACCCACTAT CTATTCGCGA TTTTGTTGCT TTAAATACTA AACCACGCCT TTTACCATGG 
CTGACTAAAA GCGAGCGAAA CCGTGTTGAA CGGATGATTC GTGAAAATAA CCTAACAAAG 
ATTGCTGAGC GGCCCCTTGG TTTAGCGTCA GGGGGTGAGA AGCAACGAGC ATATCTTGCT 
CAAGCTTTAT TACCCAATCC TAACCTCCTT ATTCTGGACG AATCGACAGC AAGTCTGGAC 
AATGAAATGA AGTATGAATT GCTAGACCTA GTAACTCGTT TTCAACAAAA TGGTTTAAGT 
GTAATGTTTA TTACTCATGA TTGGGATCTA GCAGAACAAT ATGGGACCCG TTTCTTATAT 
CTCTCTCCCG GTTCTTATTC CACTGGGCCA ATTAATGAGT TACCCAGTCC GGTAAAGGGG 
GATAAAAAGT AA
 
Protein sequence
MAVVSVDDLT IAYGNHTVID HLSFSINEGD FLVVVGENGV GKTTLVRSML GFLKPKSGTI 
TIPQSTRLGY VPQFRNIDEE YPLSIRDFVA LNTKPRLLPW LTKSERNRVE RMIRENNLTK 
IAERPLGLAS GGEKQRAYLA QALLPNPNLL ILDESTASLD NEMKYELLDL VTRFQQNGLS 
VMFITHDWDL AEQYGTRFLY LSPGSYSTGP INELPSPVKG DKK