Gene Lreu_0187 details

Gene Information

• Locus tag: Lreu_0187
• ID: 5188987
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactobacillus reuteri DSM 20016
• Kingdom: Bacteria
• Replicon accession: NC_009513
• Strand: +
• Start bp: 219982
• End bp: 220620
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 640589982
• Product: binding-protein-dependent transport systems inner membrane component
• Protein accession: YP_001270794
• Protein GI: 148543424
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1174] ABC-type proline/glycine betaine transport systems, permease component

Plasmid Coverage information

• Num covering plasmid clones: 65
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGAGT ATTGGAATGA GAATTGGCCG ATAATGCTTG ATGATGTCCA GCAACATGCA 
ACGATGGTTC TTTCTTCATT AGCAATTGCC TTAGTGATTG CAGTTGTAAT AATCTTATTA 
TTCTTACGGC GTGAAAAGTG GCTTAATAGT TTGATCTATT TCTTTTCACT CTTATATTCA 
ATTCCAAGTT TTGCATTTTT TGCCTTACTC TTGCCGATTT CTGGATTAGG AATGAAGACT 
GCAATTATTG TTTTAACGAT CTACTCTGAA TATGTTTTAT TACGTTCCTT TATTACGGGA 
ATCCGTGGCG TTGATCCACA ATTAATCGAA GTTGGTGTGG GGATGGGGAT GACATCTCGA 
CAGGTTTTTC GCCAAATTCA ATTGCCACAA GCATTACCGG CAATTTTTAG TGGAATCCAA 
GTGGCCCTAG CTTCGACAAT GGCAATGGCA ACTATTGCGG CAACGATTAA TGCCGGTGGA 
CTGGGGCAAT TATTGTTTGA AGGACTGCAG GGCCAACAGG TAGTGCCGAT TTTGTGGGGA 
ACAGTTTTAA CAATGGCTTT GACATTAATT TGCGCAGGAA TTGTTCAATT GATTTCGTGG 
ATGTTGTTGC ATCGGTGGAA AGGAGTATTA AATAACTGA 

 

Protein sequence

MSEYWNENWP IMLDDVQQHA TMVLSSLAIA LVIAVVIILL FLRREKWLNS LIYFFSLLYS 
IPSFAFFALL LPISGLGMKT AIIVLTIYSE YVLLRSFITG IRGVDPQLIE VGVGMGMTSR 
QVFRQIQLPQ ALPAIFSGIQ VALASTMAMA TIAATINAGG LGQLLFEGLQ GQQVVPILWG 
TVLTMALTLI CAGIVQLISW MLLHRWKGVL NN