| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0161 |
|---|
| Symbol | |
|---|
| ID | 5189712 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 195009 |
|---|
| End bp | 196331 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640589957 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001270770 |
|---|
| Protein GI | 148543400 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 59 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAGTA CAGTAACTAA CACCCCGCAG ACAAACAGCA AGCTTAATGT AAAACGTGAT
CCTGTCAAGA CAGTAATTTT GGCTTCGATG ATGGGAACGG CAATTGAGTT TTTCGATTTT
TACGCTTACG GGACTGCATC TGCTGCTTAT TTTCCCAAAA TTTTCTTTCC GCAAATGACC
CCTTTACTTG CAACACTTTT AAGTTTGTTA ACTTTTGGAG TAGCCTTTGT AGCACGCCCG
ATAGGTTCCT TCCTATTTGG ACATTATGGT GATCGTTTAG GACGCAAGAA AACACTTGTG
GTCTCACTTT TAGTAATGGG AGTGGCGACG GTAGCCATTG GTTTCATTCC TAGCTATCAG
GTTATCGGCG TTTGGGGAGC ATTGTTACTT TGCCTTTGTC GGTTTGTCCA AGGAATCGGG
CTTGGTGGTG AATGGTCCGG GGCTGTATTA GTAGCTACTG AAAATGCTCC GGCTAATAAG
CGGGCATTAT ATGGTGCATT TCCGGAAGTG GGAGCACCAA TTGGATTCTT CCTATGCAAT
GGCTTATTCT TTGCTTTAGA ACGGGTACTA ACACCAACGC AAATGATGAC GTTTGGTTGG
CGAATTCCTT TTTGGGCCTC AGCTGTTTTA GTCGTTATAG GGTTATATGT CCGACGTCGT
TTACAGGAAA CACCTTTGTT TAAATTAGCT CAAGAACGTG ATAACACAGC TGCTTCGCCT
CTTCGTGAAG TATTCAAATC TAATTGGCGT GAAATCTTAA AAGGAACTTT CATCATGGGA
GCAACCTATG CACTATTCTT TACATTAACA ACTTGGTCAT TATCATATGC TACAACAGCT
TTAGGTTTTA CCTCTTCGGA ATTTTTATTA TTATTAATGG GTGCAATTGT TGAATTCGCT
GCTTTGATCA TGTTAACTTC TGTATTAGCA GATCGTGTTG GTCGGAAAAA AGTTCTATTA
ACTGCGTCAG TAGCACTAGT TGGCTATTCC TTGGTATTCC CATATTTCCT TACAGGACAA
CATAACTTAG TTGGCGTTTT ACTCTTCTTA GGACTAGGAT TCTTAGTAAT GGGCACTCTT
TATGGTCCAG TCGGTGCTGT TTTGCCTGAA CTGTTCCCAA CCAGAGTTCG CTATTCTGGT
GCAGGAATTA CTTATAACTT AGCTGCAGTG GTTGGGGCAG CCGTTGCTCC AACTGTAACA
ACGTGGTTAA TTGCTAATTA TGGATTACAT TCGGCTGGAT ATTATATGCT AGTTTTATCA
GTACTAGCAG TTATTTCTTG GTTATTGACA AAAGAAACAA AGGATGTGGA TTATACTAAA
TAA
|
|---|
| Protein sequence | MDSTVTNTPQ TNSKLNVKRD PVKTVILASM MGTAIEFFDF YAYGTASAAY FPKIFFPQMT
PLLATLLSLL TFGVAFVARP IGSFLFGHYG DRLGRKKTLV VSLLVMGVAT VAIGFIPSYQ
VIGVWGALLL CLCRFVQGIG LGGEWSGAVL VATENAPANK RALYGAFPEV GAPIGFFLCN
GLFFALERVL TPTQMMTFGW RIPFWASAVL VVIGLYVRRR LQETPLFKLA QERDNTAASP
LREVFKSNWR EILKGTFIMG ATYALFFTLT TWSLSYATTA LGFTSSEFLL LLMGAIVEFA
ALIMLTSVLA DRVGRKKVLL TASVALVGYS LVFPYFLTGQ HNLVGVLLFL GLGFLVMGTL
YGPVGAVLPE LFPTRVRYSG AGITYNLAAV VGAAVAPTVT TWLIANYGLH SAGYYMLVLS
VLAVISWLLT KETKDVDYTK
|
|---|
| |