| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0145 |
|---|
| Symbol | |
|---|
| ID | 5189575 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 172323 |
|---|
| End bp | 173582 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640589937 |
|---|
| Product | phosphoribosylamine--glycine ligase |
|---|
| Protein accession | YP_001270754 |
|---|
| Protein GI | 148543384 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0151] Phosphoribosylamine-glycine ligase |
|---|
| TIGRFAM ID | [TIGR00877] phosphoribosylamine--glycine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00000216858 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGC AGGTCAACGT ATTAGTTGTA GGTGAAGGCG GTCGTGAATT TGCCGTGGCG
AAAAAATTAC AAGAAAGTCC CCGTGTTAAG CAAGTTTATT GTGCGCCAGG CAACGTGGGG
ATGTCGACTG TAGGAGTGGT TCCCGTTGCA ATTGCGGAAA CTGACTTTGC TAAGCTGATT
CAATTTGCTA AAGAACATAA TGTCGCGTGG ACATTCGTGG GCCCTGAGGA TTGCTTGGTT
GATGGGATTG TTGATGAATT TAAGGCCGCT GGATTAAAGA TTTTCGGTCC TGATGCGCGG
GCTGCCCAAT TAGAAGGTTC GAAAGACTAT GCCCTTAATT TTATGAATAA TTATCACGTT
CCCACTGCCC GCCATGCGAC ATATCGGGAT CAAACAGCAG CAATTAATAA CGTTGGCCAA
TTTGGCTTTC CGGTAGTAAT TAAAGAAAAT GGTTTAGCAG GAGGAAAAGG GGTTGTCATT
GCAAAGGATC GTGTAGAAGC AATTAAGACA ATCAAAGAAA TGTTTGTCAA TGGTCAGGCG
CGCCTTGTGA TTGAAGAATG TCTATCAGGT CCTGAATATT CAATGTTTGT TTTGATTAGT
AATGGTCACT ATCGAATTTT GCCCATGGCT CAAGACCACA AACGAGCATT TGATGGCGAT
AAAGGTCCTA ATACTGGGGG AATGGGGGCT TATAGTCCCT TGCCACAACT TTCCTCAGCT
GTTCGTCAAC AAATGATTGA TGAAGTACTT AAACCAACAG TTGATGGTTT GGTGGCTGGC
GAGTATCACT ACCATGGGAT TTTATATATT GGCCTTATTT TGACTGACGA TGGTCCAAAA
GTAATTGAAT ATAATGTTCG TCTAGGTGAT CCAGAGACCC AGGTGATTTT GCCCCGCATG
AAAACCGACT TGTTTGAACT TGTAGATGCA GCAATTAATG ATCGACCATT ACCAGAAGTT
GAAGAAAATG AAGATGCTTG TTTTGGCGTT GTTTTGGCAT CGAAAGGATA TCCAACTAAG
CCAATCCATG GACAAAAGCT GGGAACATTT CCCGTTGATC CCAATGTCAC TATTGATTAT
GCAAATGTTG CTGGGACGAT TAATGACTTA AGAGGGGCAG GCGGACGTTT ACTAATGGTG
ATCGGGAAAG ATGATTCTCT TCAAAAAGCC CGCGATCACG TTTACGACTA CTTGCGCCAG
CTTGATGAAC CTGAATGTTT TTATCGTCAT GATATTGGTG CAAAAGCTGG ACTACAATAA
|
|---|
| Protein sequence | MEKQVNVLVV GEGGREFAVA KKLQESPRVK QVYCAPGNVG MSTVGVVPVA IAETDFAKLI
QFAKEHNVAW TFVGPEDCLV DGIVDEFKAA GLKIFGPDAR AAQLEGSKDY ALNFMNNYHV
PTARHATYRD QTAAINNVGQ FGFPVVIKEN GLAGGKGVVI AKDRVEAIKT IKEMFVNGQA
RLVIEECLSG PEYSMFVLIS NGHYRILPMA QDHKRAFDGD KGPNTGGMGA YSPLPQLSSA
VRQQMIDEVL KPTVDGLVAG EYHYHGILYI GLILTDDGPK VIEYNVRLGD PETQVILPRM
KTDLFELVDA AINDRPLPEV EENEDACFGV VLASKGYPTK PIHGQKLGTF PVDPNVTIDY
ANVAGTINDL RGAGGRLLMV IGKDDSLQKA RDHVYDYLRQ LDEPECFYRH DIGAKAGLQ
|
|---|
| |