Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0103 |
Symbol | |
ID | 5189951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 130420 |
End bp | 131304 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640589895 |
Product | 3-hydroxybutyryl-CoA dehydrogenase |
Protein accession | YP_001270712 |
Protein GI | 148543342 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000058516 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAATA TAATGATTGC CGGCGCTGGC GTATTAGGTA GTCAGATTGC ATATCAAACG GCTTTATCCG GCTTTAATGT CAGCGTATAT AATCACCATA TTGATACCGC TGAGCGACGG ATTAAGGCGC TGAAAAGTGA TTATGAACGT GACTTGCATT TGACTGATAA GGAATTTCAA CAGGGCCTTA ATAATATTAA AGTGATTACT GATGATGTTG CGACCGCGGT TAAAGATGCT GATTTAATGA TTGAAGCATT ACCAGAATCG TTAGAGTTAA AGGAGCAGTT TTACGAAGAG GTTTCAGAAT TAGCCCCTGA AAAAACAATC TTTGCTAGCA ACTCCTCTAC ATTTATCCCT AGCCAACTAG CTCCTTATAC TGATCGGCCA GAAAAATTTC TTAATATGCA CTTTGCTAAC CAAATTTGGA AATTTAATGT GGTCGAAATT ATGGGCACCT CCCAAACAAG TCCAGAGGTG ATTGAAGAAG CTACAAAGTT TGCCCGGGAA ATAAAGATGG TTCCTGTTAT CCTTAATAAA GAACAACACG GTTATATTCT GAATTCCCTT TTGATTCCGT TACTTGCATC TGGTCTTAGT TTATGGGCTA AAGGAGTTGC TGATCCAGCG ATGATTGATA AGGATTGGAT GATTTCGACA GGTGCACCAA TGGGACCATT TGGTATTTTA GATATGGTTG GTTTACGGAC AGCAGCGCAA ATCGAACGGA ATGCCTATGC CCAGACTAAG GATGAAAGTC ATAAGGAAAT TGCCGATAAG ATGGAACAGA TGATTCAAGA AGGGCACGAA GGAAAAGAAT CGGGACAAGG ATTTTATAAT TATCCGAATC CAGCCTTCAT GGATCCAGAT TTTCTGAAGC ATTAA
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Protein sequence | MKNIMIAGAG VLGSQIAYQT ALSGFNVSVY NHHIDTAERR IKALKSDYER DLHLTDKEFQ QGLNNIKVIT DDVATAVKDA DLMIEALPES LELKEQFYEE VSELAPEKTI FASNSSTFIP SQLAPYTDRP EKFLNMHFAN QIWKFNVVEI MGTSQTSPEV IEEATKFARE IKMVPVILNK EQHGYILNSL LIPLLASGLS LWAKGVADPA MIDKDWMIST GAPMGPFGIL DMVGLRTAAQ IERNAYAQTK DESHKEIADK MEQMIQEGHE GKESGQGFYN YPNPAFMDPD FLKH
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