| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2900 |
|---|
| Symbol | |
|---|
| ID | 6878904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 2880564 |
|---|
| End bp | 2880959 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642790753 |
|---|
| Product | histidine triad (HIT) protein |
|---|
| Protein accession | YP_002221291 |
|---|
| Protein GI | 198284970 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.276504 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0712491 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCC TGTTCAGCCG CATCATCAAC GGTGAAATCC CGGCGCAGAA AGTGCTGGAA
GACGACCGTT ATCTGGCCTT TCTCGATATC CGCCCAGTAC GGCCGGGGCA TACCCTGGTC
ATCCCCAAGG TGGAGCACGA TTATATTTTC ACGCTGGATG ACGCAACCCT GGCGGGGCTT
CTGCCCTTTG CCAAACGCGT CGTGCCGGCG CTGGAGCAGG TCACCGGCTG CAAGAGGGTC
GGGATCATGG TGGCGGGGCT GGAAGTGCCC CATGCCCATG TACACCTGAT CCCGATGAAC
GCCATCCCGG ACCTGAATTT CGCCAATGCC AGAGATACCC CGGCGGCGGA ACTGGCGGCG
ATGGGGGATA GGATACGCGC GGCGTTGCGG GGTTAA
|
|---|
| Protein sequence | MSTLFSRIIN GEIPAQKVLE DDRYLAFLDI RPVRPGHTLV IPKVEHDYIF TLDDATLAGL
LPFAKRVVPA LEQVTGCKRV GIMVAGLEVP HAHVHLIPMN AIPDLNFANA RDTPAAELAA
MGDRIRAALR G
|
|---|
| |