Gene Lferr_2793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2793 
Symbol 
ID6878796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2772175 
End bp2774430 
Gene Length2256 bp 
Protein Length751 aa 
Translation table11 
GC content57% 
IMG OID642790647 
ProductDNA methylase N-4/N-6 domain protein 
Protein accessionYP_002221186 
Protein GI198284865 
COG category[L] Replication, recombination and repair 
COG ID[COG2189] Adenine specific DNA methylase Mod 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAC AAGACAAGAA AGCCTACGAC CTGAGCGAAG CCGAACAACG CGACCTGGTG 
ACCCTGATCC AGCAAGGCAA GGCCCTGCCG GAGAAATACC GCTTCATCCT GTTCGAGGAC
AAGCGCGAGG TCGAGCTGGT GTGGAACGGC AAGACGCGGG ACGTGTGCAC CACGGTGCTG
CCCTTCCAGA CCCTGGAGCA TGTGGACGAG CCGCGCGCCG AGACTAAAAC CCAGGGAGAT
CTGTTCGACC CGCGCGGCCG CCAGGTCAGG GGTTGGACCA ATAAGCTGAT CTGGGGCGAC
AACAAGCTGA TTCTCTCCTC GCTCAAGAGC GGCGCGCTGC GCCGCCAGAT CGAGGACGCG
GGCGGCTTGA AGCTGATCTA CATCGACCCA CCATTCGATG TCGGCGCGGA TTTCAGCATG
GATGTCGAGA TCGGCGGTGA GACCTTCCAC AAGGAAGCGA ACTTACTCGA GCAAATCGCC
TACCGCGATA CTTGGGGGCG GGGGGCGGAT AGTTTCATTT CAATGATCTA TGAGCGCCTG
ATCCTCATGC GCGATCTGAT GGCAGAGGAC GGGAGCATCT ATGTGCATTG CGATTGGCGA
CTGGCAAGTC TTGTCCGTAT CGCATTAGAT GAAGTATTTG GGAAAGGAGG CGATAACGAA
GCTCCTGGAT TTCGGAACGA GATCATTTGG TACTTCAGTC AAGGTGGAAA GGGGGTAAAG
CACTGGGCGC GAAAACACAA TACCATCCTT TATTATTCTA AGACTGATTC TCCTATCTTT
AACCAAGATG CGGTCAGACT TCCGTTTACT CCACATAAGC AGGATGAGAA GGGCGAGAAC
TATGGCGGGC GTATGGGCGT TGACGAGGAC GGACGGCGTT ACGTAGAAAA GTGGGGAACT
GGGAAGAAGA AGCTATATCG GTACTACCTG GATGAAGGCA AATTACCCGA GGATGTTTGG
ACCGACATTC AGTCTATTCA GTCTGCGGCA ACTGAACGCA TGGACTACCC GACTCAAAAG
CCGGAAGCCC TTCTCGAGCG CATTATCAAG GCTAGTAGTA AAGAAGGAGA TTTGGTTGCC
GATTTTTTCG TTGGTTCCGG CACGACCGCT GCCGTCGCCG AAAAATTGGG GCGCAAATGG
ATTGCCACCG ATCTTGGGAA ATTCGGTATC CATACGACCC GCAAACGGCT CATCGGTGTA
CAACGCGAGA AAAAGGCCGC CGAACAAGAC TTCCGTGCTT TTGAGGTGTT GAACCTTGGC
CGCTACGAGC GCCAAGCCTA CTTGAATGTC GGTGGGCGGC TCTCAGGCGA ACAGAAGGCC
CAAGCCCTCA CCCAGAAAGA AAACGAGTTC CGCGACCTGA TCTTGCGCGC CTACAAGGCC
ACAGAATTTG GCGGCACCGA AGGCACGCAG GCGCAGGACG GCTTTTTCCA CGGCGCGCGC
AATGGCCGGC TGGTGGTGAT CGGGCCGATC AACCTGCCCG TGGGTCGGCT GTTCGTTGAG
GAAGTCATTA CCGAGTGCCG CAAGCGCGGT GCTTCGCGTG TAGACGTGCT GGCCTTCGAG
TTCGAGATGG GGTTGTTTCC GGCCGTGCTT GAGGAAGCGC GTGGCAAGGG CATCGACCTG
GCCCCGAAAT ACATTCCCGC CGAGGTGTTC GACAAGCGGG CCATCGACAA GGGTCAGGTG
GTGTTCCACG ACATCAGCTT CGTCGAAGCC ACGCCGCGCT ACGACAAGAA GAACAAGTTC
GCGGTCACCA TTGAGCTAAC GGATTTCTCG GTCTATTACA CCCAGGGCGC CGCCGAGGCC
GCGATTGCCG CCATGAAGGA AGGCAAGAGC GAGGTCATGT GCGAACAGGG TCAGCTCTAC
AAGGTGAGCA AGAACAAAGA AGGGATCGTC ACCAAGGCGC GCCTGACCAA GCACTGGACG
GACTGGGTGG ATTACTGGGC GGTGGATTTC GACTATATGA GCCGCAGAGA AATCATCAAG
GTGCCAGTGG GCACCGGCCT CAGTGGAGTC GCCTCACTGC TAGGCATTGA ACCGCCGCAA
GACGAACTGA TTACGCAGGA ATTCGAGGAG CGCTGGACGG GCGGCTACAT CTTCGAGAAT
GAATGGCAGA GCTTCCGCAC CCGCCAGAAT CGCGACCTGG AGCTGGCAAC GGCCGTGCAT
ACTTATGACC GGCCGGGGCG CTACACCGTA GCTGTCAAGG TAATCGATAT TTTCGGCAAT
GACACGATGA CGCTCGTGCC AGTGAACATT GGTTAA
 
Protein sequence
MAKQDKKAYD LSEAEQRDLV TLIQQGKALP EKYRFILFED KREVELVWNG KTRDVCTTVL 
PFQTLEHVDE PRAETKTQGD LFDPRGRQVR GWTNKLIWGD NKLILSSLKS GALRRQIEDA
GGLKLIYIDP PFDVGADFSM DVEIGGETFH KEANLLEQIA YRDTWGRGAD SFISMIYERL
ILMRDLMAED GSIYVHCDWR LASLVRIALD EVFGKGGDNE APGFRNEIIW YFSQGGKGVK
HWARKHNTIL YYSKTDSPIF NQDAVRLPFT PHKQDEKGEN YGGRMGVDED GRRYVEKWGT
GKKKLYRYYL DEGKLPEDVW TDIQSIQSAA TERMDYPTQK PEALLERIIK ASSKEGDLVA
DFFVGSGTTA AVAEKLGRKW IATDLGKFGI HTTRKRLIGV QREKKAAEQD FRAFEVLNLG
RYERQAYLNV GGRLSGEQKA QALTQKENEF RDLILRAYKA TEFGGTEGTQ AQDGFFHGAR
NGRLVVIGPI NLPVGRLFVE EVITECRKRG ASRVDVLAFE FEMGLFPAVL EEARGKGIDL
APKYIPAEVF DKRAIDKGQV VFHDISFVEA TPRYDKKNKF AVTIELTDFS VYYTQGAAEA
AIAAMKEGKS EVMCEQGQLY KVSKNKEGIV TKARLTKHWT DWVDYWAVDF DYMSRREIIK
VPVGTGLSGV ASLLGIEPPQ DELITQEFEE RWTGGYIFEN EWQSFRTRQN RDLELATAVH
TYDRPGRYTV AVKVIDIFGN DTMTLVPVNI G