Gene Lferr_2727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2727 
Symbol 
ID6878731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2715010 
End bp2715516 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content47% 
IMG OID642790587 
Producthypothetical protein 
Protein accessionYP_002221126 
Protein GI198284805 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000651126 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCAGAA AAGAAACTGT AGTTCATATT TTCAAGGACG GTGAGCGCAA TATTACGGCA 
TGCAGGCTGG ACGATTCCGA GAATATATCC TTAAACTTTT GCTTGCCCGA TATACAACTC
ACCCCATTGC ATTTGCTCAA CATGGCTCTT GGCCGATGCC TCGTGGAACT CACGTTACGG
TTTCTGGAAC GACGGGACTT AAGGGCAACC TGCCTGATGA GCATCTGCAC AGCTGTAAAA
ACCACTGGCG CGGTGCGGAT TGATGAGATC AATATTACAT TGACATTACC ATTGCAATTA
TCACCTGATG ATGAAGTGAT CCTGATCAGG ATGCTACACC AATGTCCGAT ACATGCAGCT
ATCACCGGAA GCGTTTCCAT CACCTTACAG ATAGGTGATG ACCGCGAAGC CCTTTCACGC
TATGAGCAGA ATCCATTATT CCAAACGTCT GCCAACATAT TGCACGCCCA TACGGTTAGC
GACAACGCTA ATGATATCCG GATATAG
 
Protein sequence
MSRKETVVHI FKDGERNITA CRLDDSENIS LNFCLPDIQL TPLHLLNMAL GRCLVELTLR 
FLERRDLRAT CLMSICTAVK TTGAVRIDEI NITLTLPLQL SPDDEVILIR MLHQCPIHAA
ITGSVSITLQ IGDDREALSR YEQNPLFQTS ANILHAHTVS DNANDIRI