Gene Lferr_2658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2658 
Symbol 
ID6878657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2637655 
End bp2638023 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content60% 
IMG OID642790515 
Producttwin-arginine translocation protein, TatB subunit 
Protein accessionYP_002221059 
Protein GI198284738 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1826] Sec-independent protein secretion pathway components 
TIGRFAM ID[TIGR01410] twin arginine-targeting protein translocase TatB 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGACT TCAGCTTTGG CGAACTCGCG CTGCTCGGAA TCATCGCGCT GCTCGTGGTC 
GGGCCGGAGA AAATGCCCCA AATCGCGCGC ACCGCGGGGA AGTGGTACGG CGCCATGCGG
CGTACCATGA CGAGTCTGCG CTCCGAGGTT GAGCAGCAGT TGTTGCTGGA TGATCTGCGC
CAGGAAGCCA ACAAACTGCG TGACTATGCC CACGAGGAGT TGCTGCCTGC CGACATCACC
GCTTCAGACA CCCCGAAAAC AACCGGTGAG AAGCCCGAAA TGAAGGACGC TCACCAGCAG
GGTGAACTCG ATATCATGCC GGCAACGCAA CACGCAGACC TGCCGGGACC GGAAGACCGC
GTACATTGA
 
Protein sequence
MFDFSFGELA LLGIIALLVV GPEKMPQIAR TAGKWYGAMR RTMTSLRSEV EQQLLLDDLR 
QEANKLRDYA HEELLPADIT ASDTPKTTGE KPEMKDAHQQ GELDIMPATQ HADLPGPEDR
VH