Gene Lferr_2630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2630 
Symbol 
ID6878629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2615189 
End bp2616121 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content60% 
IMG OID642790487 
ProductHPr kinase 
Protein accessionYP_002221031 
Protein GI198284710 
COG category[T] Signal transduction mechanisms 
COG ID[COG1493] Serine kinase of the HPr protein, regulates carbohydrate metabolism 
TIGRFAM ID[TIGR00679] Hpr(Ser) kinase/phosphatase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGAC AAATCAGCCT GCGTCGGCTC TTTGAGGATC TGCGCGGCGA ACTGCAATGG 
CAATGTCTGT GTCAACCGGG TGAAGAGAAT TACCTCGGCG GCGATCTGCT GGCGGAAGGC
GATGCGGGTG GGGCGGCACT GGTCGGGTTT TTCAATTTTA TCCGACCGTA CCCGGTACAG
ATCGCCGGGG ATTGCGAGCT GGCCTATCTG CGCGCCCATC CGCAGGCTAT GGAGCAGTTT
TTGTCCCCCA ATTTGCGTCT GCTCATTATT TGTGAGGGCC AGACGCTGGA TGAGCATTTT
TATGGCGATC TGAACGCCCG CCATATCGCG GCGATGACGA CGCCCGCGGC CGCCAAGGGG
GTGCTGGCAC GGGTGCAACA CTACCTGCAT CGGGAGCTGG CGGCCCGCCA GCAGGTGCAC
GGAGTGCTGG TCGATGTGCT CGGGGTCGGA CTGCTCTTGC AGGGCGAGGT GGGAATTGGC
AAGAGCGAGT TGGCGCTGGA GCTGGTGAGC CGTGGCCATC GCCTGGTGGC CGACGATAGC
GTGCTTTGTA TCCGAGAAGC CCCGAATATC CTGACGGGGC ACTGTCCGGC GGCGCTGCAG
AATTTCCTGG AAGTGCGCGG TTTGGGCATT GTCAATATTC GTGAATTCTT CGGTGCCGCC
GCCATTGTGC GCTCCAAACG GATTCGGCTG GTTGTCGAAA TCCGGGATAT GAGCGATACG
GAAATGGCGA ATATCGATCG GCTGCAGGGT AAGGTGGATC ACCTGGATAT TCTTGGAATT
CGGTTGCCGC GTTTGTGCCT GCCGGTTTCT GCGGTGCGCA ATCTGGCGGT GCTGGTGGAA
GCGGCAGCAC GCAGCCAGTA CGTGAAGGAG TCCGGCGGCG ATATGCTGGC GGACTTCGAG
GCGCAGGTAC TGCAGAATGT CGGAGAAGAA TGA
 
Protein sequence
MERQISLRRL FEDLRGELQW QCLCQPGEEN YLGGDLLAEG DAGGAALVGF FNFIRPYPVQ 
IAGDCELAYL RAHPQAMEQF LSPNLRLLII CEGQTLDEHF YGDLNARHIA AMTTPAAAKG
VLARVQHYLH RELAARQQVH GVLVDVLGVG LLLQGEVGIG KSELALELVS RGHRLVADDS
VLCIREAPNI LTGHCPAALQ NFLEVRGLGI VNIREFFGAA AIVRSKRIRL VVEIRDMSDT
EMANIDRLQG KVDHLDILGI RLPRLCLPVS AVRNLAVLVE AAARSQYVKE SGGDMLADFE
AQVLQNVGEE