| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2612 |
|---|
| Symbol | |
|---|
| ID | 6878611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 2591370 |
|---|
| End bp | 2592065 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642790469 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002221013 |
|---|
| Protein GI | 198284692 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGTGACT CTACCCCTCC TGAGGTTCCT GATAAGCCGT CCCGCTGGAG CTATCAGGGT
CAATCAAAAA GTTTTCGTTA TGCCATTATC AGTGCGTTGG CCGTGGAAAT TTCTCTGGTG
GCTGGTCTCA TCTTGATTAC GCATGATCAT CCAACACCTA AGAAAACTCC CGAGGTGATC
AGCGTAAAAA TTGTTCACCT ACCGCCACCG CCACCACCAC CGCCACCGCC TAAGGTGAAA
CCGGTGCCGC ATCCACCCAA ACCGGTAAAA ATACCGGTTC CAGTGGTGCA TCGTCCTGCA
CCATTGCCGG TAAAGCCTCC GACGCCTCCG CCACCCCCTA AACAAGTGGT GAAGACGCCA
CCTCCGCCGG TTAAAACACC TCCACCTCCA CCAACACCCG CTCCGGTATA TAGCGGAGTC
GGAGCTTATG GTTCAGGTGC CAGATCGCAG GTGCGAAACC ATGTTCATGT CTCAGCCATT
ATTAAACGAC TGGGTTTGCA AGGTACTGTG GTTGTCAGCT TCCAATTAGG CCCAGCAGGT
GGGAAAGCGA AAGACGTGCA TGTGGTGGGT GGTTCACATA ATCCCCTGCT TCGCAAGGCT
GCTCTGGCTG CCGTGTCCAA CAGCACGTTT CCGGCATTTA CCAGTCACAT GCCCCCTCAC
ACTTTATCGT TCACGGTGCC AATAGATATT TCGTGA
|
|---|
| Protein sequence | MGDSTPPEVP DKPSRWSYQG QSKSFRYAII SALAVEISLV AGLILITHDH PTPKKTPEVI
SVKIVHLPPP PPPPPPPKVK PVPHPPKPVK IPVPVVHRPA PLPVKPPTPP PPPKQVVKTP
PPPVKTPPPP PTPAPVYSGV GAYGSGARSQ VRNHVHVSAI IKRLGLQGTV VVSFQLGPAG
GKAKDVHVVG GSHNPLLRKA ALAAVSNSTF PAFTSHMPPH TLSFTVPIDI S
|
|---|
| |