Gene Lferr_2589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2589 
Symbol 
ID6878588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2565631 
End bp2566824 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content59% 
IMG OID642790446 
Productpolysaccharide export protein 
Protein accessionYP_002220990 
Protein GI198284669 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1596] Periplasmic protein involved in polysaccharide export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCAG CGGTGGGCGT TATGCGGTCA AAGAGTGTGC TCCAATTGGC GATGGCCTTC 
GCCATGATGG GGCTCTGCGG CTGCGCCTCT TACCTCCCTT ATTCGGGTCC TCGCACCTCG
TCGGTCGTGG ATGCCGGGGA GAACAAGGCC TTGGCTGGCA TCCAGGTGGT GGATGTCAAT
TATGCCCTGG CGCGTCTCAT TAAGGATAAG CTGGAGAAAC CCGCCTTTTC GTCCCTGGCG
GACTTGGCCA ACGCGAACCC CAATCTGTAT ACTGTGGGAC CAGGGGATAC CCTGCAGGTG
TACATCTGGG AGGCGCCTCC GGCCATGCTC TTTACCTCCG TCCCTAGTTC CATGGCTACG
CCATCGGGTT CGATGATGAC CGCGATCCCT GAGCAAATAG TGAGCAGTGA CGGTGATATC
GCCATTCCTT TTGCGGGTGA GATTTCCTGT TCCGGTCGGA CACTGACTCA GATCGAGGCG
GAAATCCGGC AAAAACTGCG GGGTCAAGCC AACGACCCGC AGGTGGTGGT GAGTTTGGTC
AACAATTATT CACGGAGTGT TACCGTCGTG GGCAACGTGA CGCGTAGCAC GTCGGTACCC
CTGGTGCCGG GCGGTGTGAA TGTGCTCCAG GCCCTGGCGG CGGCGGGCGG GGTGGACAAG
CCGGTAAACA AAGTCACCAT GCAGATTTCC CGCGCCGGAA AGGTGGTGGA TATGCCTCTG
GAAAGCGTCA TCAAAAATCC CCAGGAAAAT ATCTCATTAC ATGCGGGGGA CATACTCACG
GCCCTGTATG AACCCCTGCA TGTCACCATC CTGGGAGCTA CGACGCAGAG CCGGGAGCTG
GACTTTGAAG CGACGGGCGT CAGCCTGTCC CAGGCCTTGG CCCGCGCGGG CGGTCTGAAT
GGTCATGAGG CGGACGCGAA AGGGGTCTTC GTCTTCCGCT TTGAAAAACC CTCCCTGCTG
CCCCAATGGC CGCATCCCGT GCAGGTGGCG CAGAACGGCC TGGTCCCGGT GGTGTTCCGC
TTTGATCTCA GTAATCCGGC TACGTTGTTC GCGGCGCAGA CCTTCCCCAT CCAGAATCAT
GACCTGATTT ATGTGGGTAC CGCCCCGATC ACGGAACTTC AGAAGTTTCT GGGCATGGTT
GTGCAGATCG TCTACCCCAT TCAGGGTCTG ACCAATGCAG GGGTGCTCCC TTGA
 
Protein sequence
MKAAVGVMRS KSVLQLAMAF AMMGLCGCAS YLPYSGPRTS SVVDAGENKA LAGIQVVDVN 
YALARLIKDK LEKPAFSSLA DLANANPNLY TVGPGDTLQV YIWEAPPAML FTSVPSSMAT
PSGSMMTAIP EQIVSSDGDI AIPFAGEISC SGRTLTQIEA EIRQKLRGQA NDPQVVVSLV
NNYSRSVTVV GNVTRSTSVP LVPGGVNVLQ ALAAAGGVDK PVNKVTMQIS RAGKVVDMPL
ESVIKNPQEN ISLHAGDILT ALYEPLHVTI LGATTQSREL DFEATGVSLS QALARAGGLN
GHEADAKGVF VFRFEKPSLL PQWPHPVQVA QNGLVPVVFR FDLSNPATLF AAQTFPIQNH
DLIYVGTAPI TELQKFLGMV VQIVYPIQGL TNAGVLP