| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2568 |
|---|
| Symbol | |
|---|
| ID | 6878567 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 2539149 |
|---|
| End bp | 2540522 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642790425 |
|---|
| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
|---|
| Protein accession | YP_002220969 |
|---|
| Protein GI | 198284648 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0491002 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAG GCAGAATCTT ACTCGTGGAT GATGACGCCG ATCTCCTGCG TCTGTTGTCC
CTGCGCATGA AGGCGGCCGG CTATGTGGTC AGCACCGCGG CCAGCGGCAG CGAAGCGTTG
TCGGTACTGG CGATGGAGCA CCCGTCCCTG GTCATCACCG ATCTCAAGAT GGATGAGATG
GACGGTATGG CGCTGCTGGA CGCCATTCGC CGCGACTACC CGACGTTGCC CGTCATCATC
CTTACCGCCC ACGGTTCCAT CCCCGATGCC CTGCTGGCCG CTGACCAGGG TGTCTTTGCC
TTCCTCACCA AGCCTTTTGA TGGCAAGGAT CTGATGGCGC AGGTGGAGCG TGCCTTCAAC
CTGACGGCGG CGGTTCCCCC TTCTTCGGGC AAGAAGGGCC GGGACTCCAG TTGGGACCGG
ATCCTGACCC GCAGCCCCAA AATGCAGACG GTGCTGGATC AGGCGCGTCT GGTGGCGGCA
TCCGATGCCA GCGTCTTCAT TCATGGCGCC AGTGGTACCG GTAAGGAACT GCTGGCCCAG
GCCATCCATC AGGCGAGTCC GCGCCATGGC CACGCCTTTA TTGCCGTCAA CTGCGCGGCC
TTTCCCGAGC AACTGCTGGA GTCGGAACTC TTCGGGCACA AAAAGGGCGC CTTCACCGGA
GCGGCCAGCA GTCATCAGGG CCTGTTCCAG GCGGCGGAGG GCGGCACGCT TTTTCTGGAC
GAAATTGGCG ATATGCCTCT CCCGTTACAG GTCAAACTGC TGCGCGCCCT GCAGGAACGG
ATGATTCGTC CGGTCGGCGC CACCGAGAGC ATCGCCGTCG ACGTGCGGAT CATCTCCGCC
AGTCACCGGG ATTTGGAGCA GGAGATGGCT GCCCGGCGTT TCCGGGATGA TCTCTACTAT
CGCCTTTGCG TGGTGACCCT GGAACTTCCC GCCCTGGCGG AGCGCCCGGA GGATATCCCG
CTGCTGGCCG AGTTTTTCCT GCGAGATGCG GCGGCCAAGA ATCGCAAGGA CGTTCGCGGG
ATCGCGCCGG AAGCCATGGA ACTGCTCGTA TCGGCGCCCT GGCCGGGCAA TGTCCGGCAG
CTCGCCAACG TCATCGAACA GGCGGTGGTG CTGTCCACTA CCCCGCGAAT CGGGGCGCCC
CTCATCCGTC ATGCCTTGCG TGACCGGGAA GGGGAGGTCA TGCCTCTGGC CGATGCCAAG
GGCCGTTTCG AGATGAATTA TCTGATCCAG ATCATGCGCA TGACCCGCGG CAACGTGAGT
CAGGCCGCAC AACTCGCACA GCGCAACCGC ACCGAGTTTT ATCGCCTCCT GCACCGCTAC
CACCTCGATC CCGCCGCCTT CAAGGAAGCC GGTGGTGAAG CGGAGGAGGA GTAG
|
|---|
| Protein sequence | MEKGRILLVD DDADLLRLLS LRMKAAGYVV STAASGSEAL SVLAMEHPSL VITDLKMDEM
DGMALLDAIR RDYPTLPVII LTAHGSIPDA LLAADQGVFA FLTKPFDGKD LMAQVERAFN
LTAAVPPSSG KKGRDSSWDR ILTRSPKMQT VLDQARLVAA SDASVFIHGA SGTGKELLAQ
AIHQASPRHG HAFIAVNCAA FPEQLLESEL FGHKKGAFTG AASSHQGLFQ AAEGGTLFLD
EIGDMPLPLQ VKLLRALQER MIRPVGATES IAVDVRIISA SHRDLEQEMA ARRFRDDLYY
RLCVVTLELP ALAERPEDIP LLAEFFLRDA AAKNRKDVRG IAPEAMELLV SAPWPGNVRQ
LANVIEQAVV LSTTPRIGAP LIRHALRDRE GEVMPLADAK GRFEMNYLIQ IMRMTRGNVS
QAAQLAQRNR TEFYRLLHRY HLDPAAFKEA GGEAEEE
|
|---|
| |