Gene Lferr_2542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2542 
Symbol 
ID6878541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2509211 
End bp2509528 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content58% 
IMG OID642790399 
Productprotein of unknown function DUF190 
Protein accessionYP_002220943 
Protein GI198284622 
COG category[S] Function unknown 
COG ID[COG1993] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCG TCTCTGTAGT ACGCGTTTAC ATCAAGGAAG GCGACAAGCA TGGCGGACAC 
AATCTCATGG AGGAAATCTT CCGCATGCTC CACGACCAGT ACAAGGTCCA AGGCGTTACC
GCCTTTCGCG GTATCGCGGG CTTTGGCAGC AAGGGGGTGG TACATGCCGA CGATGTTCTG
CGCCTCAATG TGCATTTGCC GCTGGTACTG GAGTTTTTTG ACGAGCCGGA GACTGTGGAT
GCGGTGATGC CGCACCTGCG GGAGTTGGTG CCACCGGGCC ACATCCTGCG CTGGGAAGCC
GATTGCGGTT GCGAATGA
 
Protein sequence
MTTVSVVRVY IKEGDKHGGH NLMEEIFRML HDQYKVQGVT AFRGIAGFGS KGVVHADDVL 
RLNVHLPLVL EFFDEPETVD AVMPHLRELV PPGHILRWEA DCGCE