Gene Lferr_2523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2523 
Symbol 
ID6878522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2484379 
End bp2485365 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content62% 
IMG OID642790380 
Productprotein of unknown function DUF403 
Protein accessionYP_002220924 
Protein GI198284603 
COG category[S] Function unknown 
COG ID[COG2307] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTCGC GCGTAGCTGA AAACCTGTAC TGGATGGCCC GCTATCTGGA GCGGACCGAA 
GACATGGCCA GACTGATCAA CGCCACCACA CTGCTGCTGC TCGACCTGCC CCAGGGCGCC
GAGTTCGGCT GGGACATTCT CTTGCAGGTG ACGGGCGACG CCAAACTCTA CATGGAGCAC
TACGGCACGC CGGAGGAAGG CCGCATCATG CGGTTTCTCA TTGCCGACGA GCGCAACCCC
AACTCGGTGA TGGCCGCCAT CCATCAGGCC CGGGAGAATT GCCGCACCTT CCGCGACCTG
CTTCCCGCGG AGTTCTGGGA GCGCCTGAAC ACCCTCTTCC TCTTCGTCCG CGAACATGCC
GGCACCAGTT CAGACAGCCG TCATGCACGT TATGCCTTTC TCAACGAGGT CATTTCCCGA
CGCCACGCCC TGGTGGGGCT GCTCATCAGC AGCATGAGCC AGGACAACGT GTACCAGTTC
ATCAAGCTGG GCCGCAACAT GGAACGCGCC GACATGACCA CCCGCATCGT CGACGTGACC
AGCGCCGTGA TCCTGCCCCA GGACCAGGGG CTACAGAAAA CGACCACCAG CAGCCTCTGG
CTGGGCGTGT TGCGTGCGCT CAGCGCCTTT GAGATGTACC GCCGTCATGT CTCGGTACAG
GTGCGCAGCA ATCAGGTGGT AGACTATCTG CTCAAGGATA ACAAGTTTCC GCGCAGCATG
AAGTACTGCC TGGGGGAGAT GGAGGTGGCG CTCGCCTATC TGCCCAATGC AGGCATCCCC
GCCGAGGCCG TGCGCCGCGC GCGGCGGCGC CTGGATGCCC TGAAACTGGC GAATTTGCGC
CCGGACCTGC TCCACGAATA TCTGGATCAG GCACAAAAAG ATCTCGCCAT GGTGCACCGC
ACGATTCATG GCACCTATTT TGCCCGGGAT GATACCGGTT TCGACGGAGT GCCGAGCGGG
CTGCTCCTGA ATGCCGCGCA GGCCTGA
 
Protein sequence
MLSRVAENLY WMARYLERTE DMARLINATT LLLLDLPQGA EFGWDILLQV TGDAKLYMEH 
YGTPEEGRIM RFLIADERNP NSVMAAIHQA RENCRTFRDL LPAEFWERLN TLFLFVREHA
GTSSDSRHAR YAFLNEVISR RHALVGLLIS SMSQDNVYQF IKLGRNMERA DMTTRIVDVT
SAVILPQDQG LQKTTTSSLW LGVLRALSAF EMYRRHVSVQ VRSNQVVDYL LKDNKFPRSM
KYCLGEMEVA LAYLPNAGIP AEAVRRARRR LDALKLANLR PDLLHEYLDQ AQKDLAMVHR
TIHGTYFARD DTGFDGVPSG LLLNAAQA