Gene Lferr_2499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2499 
Symbol 
ID6878497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2462855 
End bp2463532 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content56% 
IMG OID642790355 
Productvon Willebrand factor type A 
Protein accessionYP_002220900 
Protein GI198284579 
COG category[R] General function prediction only 
COG ID[COG4245] Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.950174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAACT TTGAGCAACA ACCGTTCGGC GATGCAGAAT TTCTCGACAA CCCGCAGGCG 
CGATGCCCGT GTATCCTACT TCTTGACGTT TCTGCATCAA TGTTGGGCGC ACCCATTGAC
CAGTTGAACG AGGGGTTGCG CCATCTGCAA GAGGAAATCC AGAGCGATAG TCTTGCCGCC
AAACGTGTTG AATTTGCCAT CGTGACCTTC GGCCCTGTCA ACACGGAAAT GGTTTTTACC
AGCGCCACCA ATTTCTTTCC GCCGCATTTG TCCACACAGG GCAACACGCC CATGGGCGAA
GCTATCGAAA CCGCTTTGCG TATGCTGCGT GAGCGCAAGG ACCGCTACCG CGCCAACGGC
GTCAGCTTCT ATCGTCCGTG GGTCTTCCTC ATTACCGATG GCGCACCGAC CGACGACTGG
AGAAACGCAG CCCAACAAAT ACGGGAAGGC GAAACGTCAA AAGCCTTTAT GTTCTATGCA
ATCGGCGTGG AAGGCGCGAA CCTCGAAACC CTCGCGCAAA TCTCCGTCCG CCAGCCCCTC
AAGCTCAAGG GACTCCAGTT CAAGGAGTTC TTCCAATGGC TTTCCAACTC GCTGGGCGCA
ATGTCCCGGT CCAATCCGGG CGATCAGGTT CCGCTTGAGA ACCCCATCGC GCCGGATGGT
TGGGCAACCG CCGGATAA
 
Protein sequence
MTNFEQQPFG DAEFLDNPQA RCPCILLLDV SASMLGAPID QLNEGLRHLQ EEIQSDSLAA 
KRVEFAIVTF GPVNTEMVFT SATNFFPPHL STQGNTPMGE AIETALRMLR ERKDRYRANG
VSFYRPWVFL ITDGAPTDDW RNAAQQIREG ETSKAFMFYA IGVEGANLET LAQISVRQPL
KLKGLQFKEF FQWLSNSLGA MSRSNPGDQV PLENPIAPDG WATAG