Gene Lferr_2492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2492 
Symbol 
ID6878490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2454869 
End bp2455321 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content59% 
IMG OID642790349 
Productprotein of unknown function DUF192 
Protein accessionYP_002220894 
Protein GI198284573 
COG category[S] Function unknown 
COG ID[COG1430] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGCG GCAGGGCAGT GTGTGCAGTC ATTCCCGTCC AACTTTGGAA CGCGTATCAT 
CTACATGAAG TTTCTTCAGG AAGGCGGCTT TTGACACAAC GAGGCGTGGT TTGTCGGGAG
GATCAGGTAC TCTGGTCTGA GGCGCAGATG GCGGACGGTT TTCTCGACCG TTTGCAGGGT
TTGCTGGGCA AGGCCGGGCT CTCTGATCAG CAGGGGTTGT TGCTGACTGC TTGCGGGAGT
GTACACACCG CAGGTATGCG TTTCCCCATC GATATCATTT TCCTGGATGC CGACCTCAAG
GTATTGGCGT GCCATTCGCG TGTCAGGCCA TGGCGGTTCA AATCCTGCCG GGGCGCCCGC
ATGACGCTGG AGGTGGCGGC GGGCGGCATG GAACGTCATG GGGTGGCTTC GGGACAGTGT
CTTACGTGGC GGGCTGCATC ATTGCGGCCT TGA
 
Protein sequence
MNGGRAVCAV IPVQLWNAYH LHEVSSGRRL LTQRGVVCRE DQVLWSEAQM ADGFLDRLQG 
LLGKAGLSDQ QGLLLTACGS VHTAGMRFPI DIIFLDADLK VLACHSRVRP WRFKSCRGAR
MTLEVAAGGM ERHGVASGQC LTWRAASLRP