Gene Lferr_2481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2481 
Symbol 
ID6878479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2446125 
End bp2446616 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content61% 
IMG OID642790338 
Productprotein tyrosine phosphatase 
Protein accessionYP_002220883 
Protein GI198284562 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCC CGGAAATCCT TTTTCTCTGC ACCGGCAACT CCTGCCGTTC CATTCTCGCC 
GAAGTCACCT TCAATGCGCT GGCCGGGCCG GGCATGCATG CCACCAGCGC CGGCAGCCAT
CCTGCAGGGT ACGTCCACAC TCGTTCCATA AACCTGCTAG AGCGTGAGGG CTTTCGTACG
GACGGTCTGC ACAGCAAATC CTGGGAGGAC CTGAAAGAGA CCCCGGACAT CGTCATCACC
GTTTGCGCCG ATGCGGCCGG CGAAACCTGC CCCGCCTATC TGGGGCCAGC CATCCGTACC
CACTGGGGCG TGGAGGATCC GGCCAAAGTG ACCGGTACGG AAGCGCAGAT CGAAGCGGCT
TTCGATACTG CCTACCATAT CCTGCGCCAC CGCATCGAAG CCTTGCTGCA GTTACCGGTG
GCGGAACTGC TGGAGAAAGA TCCGGCAAAA CTGCGGCAGG AACTGGAGCG CATCGGCACT
TTGCTGCCTT AA
 
Protein sequence
MKTPEILFLC TGNSCRSILA EVTFNALAGP GMHATSAGSH PAGYVHTRSI NLLEREGFRT 
DGLHSKSWED LKETPDIVIT VCADAAGETC PAYLGPAIRT HWGVEDPAKV TGTEAQIEAA
FDTAYHILRH RIEALLQLPV AELLEKDPAK LRQELERIGT LLP