Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2479 |
Symbol | |
ID | 6878477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 2444365 |
End bp | 2445675 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642790336 |
Product | arsenical pump membrane protein |
Protein accession | YP_002220881 |
Protein GI | 198284560 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
TIGRFAM ID | [TIGR00935] arsenical pump membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGCCG TCGCCATATT TCTCGTCACC CTGATTCTCG TCATCTGGCA ACCCAAGGGC CTCAGCATCG GCTGGAGCGC CATGGGTGGC GCTGTCGTGG CGCTGGCCAC CGGCGTCATC ACCTGGAGTG ACATTCCCAT TGTCTGGCAC ATTGTCTGGG ATGCCACCTT TACCTTTGTG GCCTTGATTA TCATCTCGCT GATCCTCGAT GAGGCAGGAT TTTTTCACTG GGCGGCACTG CATGTGGTTC GCTGGGGTGG TGGTCGCGGG CGCCTGCTCT TTCCTTTGAT CGTCGTGCTG GGGGCCATGA TTGCTGCGGT GTTCGCCAAC GACGGCGCGG CGTTGCTGCT CACCCCGATC GTCATGGCCA TATTGCTGCG CCTGGATTTC ACCCCGGCGG CCACCTTTGC CTTTGTCATC GCCACGGGTT TCGTGGCCGA TACCACCAGC CTGCCGCTGA TGATTTCCAA TCTGGTGAAC ATTGTCAGTG CCAATTATTT CAACATCAGT TTTGACCGTT ATGCGACGGT GATGGTGCCC GTGGATCTGG TGGCCCTGGC GGCGACGCTG GGCGTGCTCT GGCTCTATTT CCGGCGGGTG GTGCCACGCC GATATCTGAC CCGTGACCTG CCCGAACCTG CTTCTGTCAT CATGGATCAC GTGGTTTTTC GGGCCAGTTT CCCGGTTCTG ATTCTGTTGT TGGTGGCCTA TTTTGTCACT GCGCAATGGC AGGTTCCGGT CTCCGTGGTG ACCGGAACCG GTGCGTTGAT CCTGTTGGCT CTGGCCGGGC GTTGGCTACA GGGCGGGCGC GGCGCGCGGA TTCCCGTGCG CAAAGTGCTG CGGGAAGCCC CTTGGGCGAT CGTGGTCTTC AGTCTGGGTA TGTATCTGGT GGTTTATGGA TTACGCAACG CCGGACTCAC CAGTTATGTG GCCATGGCCC TGCACTGGTT TGCTGGTCAC GGGACCGTAG CAGCGGCGCT GGGCACGGGG TTTCTCGCGG CCCTGCTGTC TTCCATCATG AACAATATGC CAGCGGTACT GGTGGGAGCG CTGGCTATCC ATCAACTGTC CTCGGTAGCA ACAGACCCCT TGCTCCGGGA GATCATGGTC TACGCCAATG TTATCGGCTG TGATCTCGGC CCCAAGTTTA CCCCGATCGG CAGCCTGGCG ACCCTGCTCT GGCTGCATGT GCTGAGTCGC AAAGGTATGA CCGTGACCTG GGGACAGTAC ATGAGAACGG GTCTGCTCAT TACCCCGCCG GTACTGCTGG TCACGCTACT GGCCCTGGCC TGGTGGCTGC CGCTGGCTTG A
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Protein sequence | MLAVAIFLVT LILVIWQPKG LSIGWSAMGG AVVALATGVI TWSDIPIVWH IVWDATFTFV ALIIISLILD EAGFFHWAAL HVVRWGGGRG RLLFPLIVVL GAMIAAVFAN DGAALLLTPI VMAILLRLDF TPAATFAFVI ATGFVADTTS LPLMISNLVN IVSANYFNIS FDRYATVMVP VDLVALAATL GVLWLYFRRV VPRRYLTRDL PEPASVIMDH VVFRASFPVL ILLLVAYFVT AQWQVPVSVV TGTGALILLA LAGRWLQGGR GARIPVRKVL REAPWAIVVF SLGMYLVVYG LRNAGLTSYV AMALHWFAGH GTVAAALGTG FLAALLSSIM NNMPAVLVGA LAIHQLSSVA TDPLLREIMV YANVIGCDLG PKFTPIGSLA TLLWLHVLSR KGMTVTWGQY MRTGLLITPP VLLVTLLALA WWLPLA
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