Gene Lferr_2407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2407 
Symbol 
ID6878405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2373926 
End bp2374288 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content57% 
IMG OID642790265 
Producthypothetical protein 
Protein accessionYP_002220810 
Protein GI198284489 
COG category[S] Function unknown 
COG ID[COG5569] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTT TTTATCTCAC CCTCATCCTG GCGTGTTTGG CGGCGGCCAC GCTTCCGGTA 
CATGCGGCCA CGGGCGATAT GCCGGGCTTG GACAACATGC GCACCGTGTC GGGCCAAATA
ATCCAGGCCC AGACCTTCAT GGGGCAGGGC AAAATCAACG GCATGAATCC CGATGCGAAC
ACGGTCATCG TCGCCATGGG TCCCGTCAAG GCCCTTGGCT GGCCCAGCAT GCCAATGAAT
TTCCTGCTCC AGAACGCGGT TATGCTCAAC AGCTACAAGG CCGGAGAAAT GGTGAATTTC
AATTTCGCAA AAGAGACCGC TGGGGGTTAC GTCATCACCA GGGTCACGCC GGTCAGACAA
TGA
 
Protein sequence
MKRFYLTLIL ACLAAATLPV HAATGDMPGL DNMRTVSGQI IQAQTFMGQG KINGMNPDAN 
TVIVAMGPVK ALGWPSMPMN FLLQNAVMLN SYKAGEMVNF NFAKETAGGY VITRVTPVRQ