Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2347 |
Symbol | |
ID | 6878341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 2323380 |
End bp | 2324561 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642790206 |
Product | 2-nitropropane dioxygenase NPD |
Protein accession | YP_002220755 |
Protein GI | 198284434 |
COG category | [R] General function prediction only |
COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.6039 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000000126588 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACTTGC CATACCTGAA GATCAAAGGA CGGTCCCTAC TCCCGGTGAT ACAGGGGGGT ATGGGTATTG GTGTTTCCGC ACACAGCCTG GCTGGGGCGG TGGCTGCGGA AGGGGCGGTC GGAACGATTG CCAGCGTCGA GTTGCGGCGA TTGCACGAGG ACCTGATGCG ACACCTGCGA CGCCTGAGAG ACCCCGCAGC CTCGGCCCAG GCAAACCTGA CCGCACTGGA TCGGGAGATT CAGGAAGCAC GGCGAATCGC CGGCAAGGAG GGGTTCATTG CCGTCAATGT CATGCATGCC ATTTCCGGCT ATCGGGAGCA CGTGCTTCAA GCCATCAGGA GTGGGGTGAA CGCGGTGATC GTGGGCGCGG GTCTGCCCAT GGATCTGCCC ACACTGGCTG CGGAATTTCC CAACGTCGCA CTGATCCCGA TCCTTTCGGA AGCGCGCGGC GTGCAGGTGG TGGTGCGCCG CTGGATGCGC CAGAAGCGCC TTCCGGACGC CATCGTCATC GAGAACCCCC AGTTCGCGGG CGGGCATCTG GGCGCCACCC GTCTGGAGGA CGTTGCGGAT TCCCGGTATG GTTTCGCCAA TGTTTTGCCC GCGATCCGCA AACTGTTCGA AGAATTAGGC CTGAAAGCCG ACCAGATTCC ACTCGTCGCC GCCGGAGGGA TCTCTTCCTT TCAGAAAATG CGGGAGATAT TTTCTCTCGG CGGCAGCGGC GCCCAGTTGG GCACCCCCTT CGCCGTAACC ACCGAAGGCG ACGCACACAT CAATTTCAAA CGTGTCCTGG CGGATGCGAT GCCTAAAGAT CTCGTGACAT TCATGAGTTC GGCGGGTTTA CCCGCGCGCG CGGTGCTTAC CCCCTGGTTG CGCCGCTACC TGGGACGCGA GAGGAGGCTG CGCGCCTGCG CGAGCCCCGA TCACTCGCAG TGCCCCAGCC AGACGGAGTG CTTGGTTCAT TGTGGTTTCA AGGATGGGCA TTCATCTTCC GGACAATTCT GCATCGAGGC GCAGCTCGCT GCTGCGCAAC GCGGTGACGT AGAGCATGGA CTGTTTTTTC GCGGCGCCGG ACAGTTACCC TTCGGACAAC AGATCAGAAG CGTTCGGGAG CTTTTTGCCA CGCTGCTGGG TGAAACCGCG CAGACCTCCG TGGAGGAGTG CATACCCAGG GTAGCTGTAT GA
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Protein sequence | MDLPYLKIKG RSLLPVIQGG MGIGVSAHSL AGAVAAEGAV GTIASVELRR LHEDLMRHLR RLRDPAASAQ ANLTALDREI QEARRIAGKE GFIAVNVMHA ISGYREHVLQ AIRSGVNAVI VGAGLPMDLP TLAAEFPNVA LIPILSEARG VQVVVRRWMR QKRLPDAIVI ENPQFAGGHL GATRLEDVAD SRYGFANVLP AIRKLFEELG LKADQIPLVA AGGISSFQKM REIFSLGGSG AQLGTPFAVT TEGDAHINFK RVLADAMPKD LVTFMSSAGL PARAVLTPWL RRYLGRERRL RACASPDHSQ CPSQTECLVH CGFKDGHSSS GQFCIEAQLA AAQRGDVEHG LFFRGAGQLP FGQQIRSVRE LFATLLGETA QTSVEECIPR VAV
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