Gene Lferr_2224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2224 
Symbol 
ID6878215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2198900 
End bp2199274 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content61% 
IMG OID642790082 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_002220634 
Protein GI198284313 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.647927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.782754 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAG AAGAGCCCTG CGCTGTGGAT GTCACCCTCC GCGTCATTGG TGGAAGGTGG 
AAGGTGCTGA TTCTTCAAGA TTTATTCACG GGAACCCGGA GATTCTCGGA AATCCACAGA
GCCGTTCACG GCATCACCCA GAAGATGCTC GCCCAGCAAT TGCGGGAGAT GGAGAGGCAC
GGCATCGTGA ACCGGCTGGT ATACGCCGAG GTGCCGCCCA AGGTCGAATA TTCCCTTACC
CCGCTGGGGA AGAGTCTTTG GCCCGTCCTC ATGTCGATGC ACAGGTGGGG GCTGGAGCAA
TTGGCGGCGA CGGGGAACTC AGCGCCAGCC ACCCGGGAAA GCGGGTCGCA AGCGGCGGAG
CTTCCCGGAC GTTGA
 
Protein sequence
MAEEEPCAVD VTLRVIGGRW KVLILQDLFT GTRRFSEIHR AVHGITQKML AQQLREMERH 
GIVNRLVYAE VPPKVEYSLT PLGKSLWPVL MSMHRWGLEQ LAATGNSAPA TRESGSQAAE
LPGR