Gene Lferr_2053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2053 
Symbol 
ID6878044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2056769 
End bp2057260 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content58% 
IMG OID642789923 
ProductATP synthase F1, epsilon subunit 
Protein accessionYP_002220475 
Protein GI198284154 
COG category[C] Energy production and conversion 
COG ID[COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) 
TIGRFAM ID[TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.376983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATGTTG TCGATGTCCA TGGCGAAGTC TACACCGGTA TGGCGCGTTT TGTGGCGGTA 
CCGGCGGAAC TGGGTGAGAT CGGTATTCTG CCGGGGCATG CGCCCCTGCT GTCCGGGCTG
CGGCCCGGCG AGTTACGCAT TACCCAGCCA GACGGCCAGA CGCAGATTCT TTTTCTGGAG
GGTGGAATGC TGGAGATTCA ACCCGATATC GTAACCATCC TCGCCGATGC CAGCCTGCGG
ATTGCGGATA TCGATATTCA CGAAAGCAGG GAACGCATCA AGGACGCACA AAGTACGCTG
GCGAAACGTG CGGTTCCGGC GATGGATTTT GCCCGCGCCG AACTGGAATT GCAGCGGGAA
GTGGCAAAAT TGCATGCGTA CCAGCGCTAC CAGATACAGG AGCAACGGGG TGGCGGTACG
GGCAATTATC ATTGGGAGCG CCCGGCTTTG CAGAATGTGC CGAAGGTGAA CGTGCAGGAA
CTGGAGGATT GA
 
Protein sequence
MNVVDVHGEV YTGMARFVAV PAELGEIGIL PGHAPLLSGL RPGELRITQP DGQTQILFLE 
GGMLEIQPDI VTILADASLR IADIDIHESR ERIKDAQSTL AKRAVPAMDF ARAELELQRE
VAKLHAYQRY QIQEQRGGGT GNYHWERPAL QNVPKVNVQE LED