| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2052 |
|---|
| Symbol | |
|---|
| ID | 6878043 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 2056102 |
|---|
| End bp | 2056752 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642789922 |
|---|
| Product | Methyltransferase type 11 |
|---|
| Protein accession | YP_002220474 |
|---|
| Protein GI | 198284153 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.782296 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCCGA TGGACGCCGC CGCCTATGAC GCCTGGTATG ATACCCCTCG CGGGCGCTGG
ATCGGCATGG CGGAGTTCCG CCTGCTTTCC AGGCTCCTGC AGACGCAGCC GGGGAACACA
CTTCTGGACG TGGGCTGTGG TACCGGCTGG TTCACCCGCC GCTTTGCCGA AGAGGGCCTC
CTCGTCACTG GCCTGGATCC CAACCCGGAC TGGCTTGCCT TCGCCCGTGC CAAGGGCCCC
CCTGAGATCC GCTGGATAGC CGGAGATGCT CGCGCACTGT CTTTTCCCGA CCGCAGTTTC
GACCAGGTGG TTTCGGTTGC GGCACTGTGT TTTGTGGAAG ATGAGCGGCG GGCCGTGGCC
GAGATCGTGC GGGTGGCGCG CCGGCGTTTC GTCATCGGCT GGCTCAACCG GGCAAGCCTG
CTTTATCGAC AGAAAGGGCA GGGCGGCGGG AGCGGGGCCT ACCATGGGGC GCACTGGCAT
CGTCCCAACG AGTTGCTCGA CTTCTTCTCC GGTTTGCCGG TACGCCGACT GGCGGTGCAT
TCCGCCATAT TTCTTCCTGC CGGGGACGGG ATGGCGCGAA CGCTGGAACA TCTGCTGCCC
CACACGCTGC CCTGGGGCGG CCTGGTAGTC ATTTCGGGGG AGACGGAATA A
|
|---|
| Protein sequence | MGPMDAAAYD AWYDTPRGRW IGMAEFRLLS RLLQTQPGNT LLDVGCGTGW FTRRFAEEGL
LVTGLDPNPD WLAFARAKGP PEIRWIAGDA RALSFPDRSF DQVVSVAALC FVEDERRAVA
EIVRVARRRF VIGWLNRASL LYRQKGQGGG SGAYHGAHWH RPNELLDFFS GLPVRRLAVH
SAIFLPAGDG MARTLEHLLP HTLPWGGLVV ISGETE
|
|---|
| |