Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2026 |
Symbol | |
ID | 6878017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 2029689 |
End bp | 2030582 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642789897 |
Product | integrase domain protein SAM domain protein |
Protein accession | YP_002220449 |
Protein GI | 198284128 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGAAG TACTTATCAA GCGCCCCACT ACGTTGGCGC GTTATCTGGG GGCTCCGCTC GCAGAAGAGA GGGATAATTT TCTCAAACAC TGTGCGCAGG TAGGTTACTC GCCCTCCATG CTCAAGAAGA TTTCTTGGGT GATCTGGGCT GTCGCAGAGT ACATTGGCAT TGATCATGGC AAGGTGACTA TGCAAGACAT TAGGATTGCT GTAGATCACC GGACGCGCTT TAAACGCCAA TCAACCCAGA CCAAGGAATC GAAGAGCACT CGCCAGATGT TTATCCATTT CGCGACGGAA TGGGCGCGAC ATATGGGTTG TCTTGGACAA GCTGCGAAAC CTCAGGATAG TTTCGCGGTA CAAATAGGGA TTTTTGCTCG CCACATGCGC GAAGAACGGG GACTATCTCC CGTGACTATT GCAACCCGTT GTGAACGGCT TGGCTGGTTT TTCGCCGGAT TAAATCCGCC ACGAGGCACG CTGGATGCAA TCACCATTTG CGATCTCGAT GCCTTCGTCG AACTGAAGGG CCAACAAGGC TGGACGCGCG CCTCACTGGG CTCATTGGCC AGCTCCTTAC GCAGCTTTTT TGCTTTTGCT GAAGCTCGCG GCTGGTGTGC CAAAGGGTTA ACGGCGACCA TTGAATCGCC GCGACTATAT ACCCGCGAGG GAATCCCGGA GGGCCCGGGT TGGGAAGATG TACAGCGTCT CTTGGTCAGT ACTGCTGGCG ATCATCCTGT AGATATTCGC GATCGCGCCA TTTTGATGTT GCTGGCATTG TACGGATTGC GCCGTGGCGA GGTCGCAGCA CTTCAACTCG AGCATTTGGA TTGGGACGGG GATAAAATTT GCGTGGTACG ACCTAAACAG CGTGCTCGAC GTCAATTATC TTGA
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Protein sequence | MMEVLIKRPT TLARYLGAPL AEERDNFLKH CAQVGYSPSM LKKISWVIWA VAEYIGIDHG KVTMQDIRIA VDHRTRFKRQ STQTKESKST RQMFIHFATE WARHMGCLGQ AAKPQDSFAV QIGIFARHMR EERGLSPVTI ATRCERLGWF FAGLNPPRGT LDAITICDLD AFVELKGQQG WTRASLGSLA SSLRSFFAFA EARGWCAKGL TATIESPRLY TREGIPEGPG WEDVQRLLVS TAGDHPVDIR DRAILMLLAL YGLRRGEVAA LQLEHLDWDG DKICVVRPKQ RARRQLS
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