Gene Lferr_1976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1976 
Symbol 
ID6877964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1974255 
End bp1974878 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content61% 
IMG OID642789845 
Productnon-canonical purine NTP pyrophosphatase, rdgB/HAM1 family 
Protein accessionYP_002220400 
Protein GI198284079 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0127] Xanthosine triphosphate pyrophosphatase 
TIGRFAM ID[TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.947466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCCT TGTTGCTGGC CACGAGTAAT GCAGGCAAGT TGCGTGAGTT GCAACCGCTG 
CTTGCCGCCC GTGGCTTCGC GCTCGTCGGC CAGACGGAAC TGGGCATCGC CGGTATGGAA
GAAACAGGCA CCACCTTTGT GGAAAATGCA TTGCTCAAGG CACGCCATGC CGCCTCGCAA
AGTGGTATGG CGGCGCTCGC CGAAGATTCC GGGCTTTGTG TGCCCTATCT CCAGGGAGCA
CCCGGCATTT ACTCCGCGCG TTATGCCGGC CCGGACGCCA GCGATGCAGC CAATAACGCG
AAGTTGCTGA GCATGCTGGC CGAGGCGCGG GGGGAAGCCC GTGCTGCCTA TTACGTGGCT
TGCATGGTTT TTCTGGAATT TGCCACCGAC CCTTCGCCAC TGGTAGCCCA AGGCTTTTGG
AGAGGGACTA TTGGTGAGCG TCCTGCCGGC GACGGGGGGT TTGGCTACGA TCCCCTGTTT
TGGCCCACGC ATGGATCTGG CAGCGCGGCA CAGTGGAGCC TGAAGAAAAA AAACGAACAC
AGCCACAGAG CGGCGGCCTT ACGCAGGTTG CTGGGGTTGC TGGCGGAGCG TCAGCAACCC
CAGCCGCTCT CGCTCAACGA CTGA
 
Protein sequence
MTPLLLATSN AGKLRELQPL LAARGFALVG QTELGIAGME ETGTTFVENA LLKARHAASQ 
SGMAALAEDS GLCVPYLQGA PGIYSARYAG PDASDAANNA KLLSMLAEAR GEARAAYYVA
CMVFLEFATD PSPLVAQGFW RGTIGERPAG DGGFGYDPLF WPTHGSGSAA QWSLKKKNEH
SHRAAALRRL LGLLAERQQP QPLSLND