Gene Lferr_1925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1925 
Symbol 
ID6877910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1916389 
End bp1916865 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content55% 
IMG OID642789795 
Productphosphonate C-P lyase system protein PhnG 
Protein accessionYP_002220353 
Protein GI198284032 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3624] Uncharacterized enzyme of phosphonate metabolism 
TIGRFAM ID[TIGR03293] phosphonate C-P lyase system protein PhnG 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.447942 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCG ATGAAGCGCC GACCAACCCC ACCGATCTGA CCAGCATGCG CGCTCGCTGG 
ATGTCGGAAA TCGCTCATGC AATGTTCTCC GACTTGGCGG ATGTTGCGGC GGGTGTCGAA
TGCTGGCCGG AGTTTACTCC TGTCAATTCG CCCGAAACCG GCCTGATCAT GGTCCATGGA
CGCATGGGCG GTCTGGGTGA TCCCTTTCCT TTGGGAGAAT GTACGGTCAC CCGCTGCATA
GTGCAGGACA ATCAAGGCTA CATGGGTTTG GCCTATGTCC TCGGCGATAA TCTTGCCCAT
GCGGAAATCG CCGCCAAACT GGATGCCCTG CTTCAACATC CGGAGCGACA ATCGTCCTTG
TGGGATCGAA TCATCGTCCC GCTCATGATC CTTCGTACAA CCCGCGAAAC GCAGATAAAG
CAGGAGAATC AACATAGTCG TGTGCAGTTC TTCACAATGG AAACCATGCG GTCATGA
 
Protein sequence
MKFDEAPTNP TDLTSMRARW MSEIAHAMFS DLADVAAGVE CWPEFTPVNS PETGLIMVHG 
RMGGLGDPFP LGECTVTRCI VQDNQGYMGL AYVLGDNLAH AEIAAKLDAL LQHPERQSSL
WDRIIVPLMI LRTTRETQIK QENQHSRVQF FTMETMRS